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Simplify further (#628)
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* Removed unused dependencies

Signed-off-by: zethson <[email protected]>

* Tutorials update

Signed-off-by: zethson <[email protected]>

* Readd fhiry

Signed-off-by: zethson <[email protected]>

* Skip jupyter_core

Signed-off-by: zethson <[email protected]>

* Fix import

Signed-off-by: zethson <[email protected]>

* Don't fail session-info

Signed-off-by: zethson <[email protected]>

* Revert session info change

Signed-off-by: zethson <[email protected]>

* Refactoring

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* Session info

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* Docs

Signed-off-by: zethson <[email protected]>

* Docs

Signed-off-by: zethson <[email protected]>

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Signed-off-by: zethson <[email protected]>
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Zethson authored Dec 18, 2023
1 parent 8ce852d commit 923e1b3
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2 changes: 1 addition & 1 deletion docs/tutorials/notebooks
Submodule notebooks updated 1 files
+81 −288 mimic_2_fate.ipynb
4 changes: 2 additions & 2 deletions ehrapy/io/_write.py
Original file line number Diff line number Diff line change
Expand Up @@ -30,8 +30,8 @@ def write(
Args:
filename: File name or path to write the file to
adata: Annotated data matrix.
extension: File extension. One of h5ad, csv
compression: Optional file compression. One of gzip, lzf
extension: File extension. One of 'h5ad', 'csv'. Defaults to None which infers the extension from the filename.
compression: Optional file compression. One of 'gzip', 'lzf'. Defaults to 'gzip'
compression_opts: See http://docs.h5py.org/en/latest/high/dataset.html.
Examples:
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