Try patching .A

theislab · Dec 3, 2024 · 00ec9e1 · 00ec9e1
1 parent c2cb40d
commit 00ec9e1
Showing 1 changed file with 6 additions and 1 deletion.
diff --git a/src/cellrank/__init__.py b/src/cellrank/__init__.py
@@ -1,5 +1,7 @@
 from importlib import metadata
 
+import scipy.sparse as sp
+
 from cellrank import datasets, estimators, kernels, logging, models, pl
 from cellrank._utils._lineage import Lineage
 from cellrank.settings import settings
@@ -14,4 +16,7 @@
 except ImportError:
     md = None
 
-del metadata, md
+# pygam uses `.A`
+sp.spmatrix.A = property(lambda self: self.toarray())
+
+del metadata, md, sp