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EBR-91: Migrate tvb-ext-unicore to Jupyter4 and Python3.11 #370

EBR-91: Migrate tvb-ext-unicore to Jupyter4 and Python3.11

EBR-91: Migrate tvb-ext-unicore to Jupyter4 and Python3.11 #370

Workflow file for this run

name: Build
on:
push:
branches:
- 'main'
pull_request:
types: [opened, synchronize, reopened]
concurrency:
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: [ "3.8", "3.11", "3.12" ]
steps:
- name: Checkout
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Base Setup
uses: jupyterlab/maintainer-tools/.github/actions/base-setup@v1
- name: Install dependencies
run: |
jlpm install
python -m pip install -U "jupyterlab>=4.0.0,<5" check-manifest pyunicore pytest pytest-mock build
- name: Build the extension
env:
CLB_AUTH: 'TEST_TOKEN'
run: |
set -eux
jlpm
jlpm run build
python -m pip install .[test]
jupyter server extension list 2>&1 | grep -ie "tvbextunicore.*OK"
jupyter labextension list 2>&1 | grep -ie "tvb-ext-unicore.*OK"
python -m jupyterlab.browser_check
python -m build --sdist
pip uninstall -y "tvb-ext-unicore" jupyterlab
- name: Run Python & JS tests
run: |
set -eux
jlpm
jlpm run test
pytest tvbextunicore -r ap
yarn test
- name: Package the extension
run: |
set -eux
pip install build
python -m build
pip uninstall -y "tvb-ext-unicore" jupyterlab
- name: Upload extension packages
uses: actions/upload-artifact@v4
with:
name: extension-artifacts-${{ matrix.python-version }}
path: dist/tvbextunicore*
if-no-files-found: error
sonar_cloud:
runs-on: ubuntu-latest
steps:
- name: Checkout
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Base Setup
uses: jupyterlab/maintainer-tools/.github/actions/base-setup@v1
- name: Install dependencies
run: python -m pip install -U "jupyterlab>=4.0.0,<5" check-manifest pyunicore pytest pytest-mock pytest-cov
- name: Compute coverage
run: |
python -m pip install .[test]
pytest -v --cov --cov-report=xml
yarn test --coverage
- name: SonarCloud Scan
uses: sonarsource/sonarcloud-github-action@master
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
SONAR_TOKEN: ${{ secrets.SONAR_TOKEN }}
test_isolated:
needs: build
runs-on: ubuntu-latest
steps:
- name: Install Python
uses: actions/setup-python@v5
with:
python-version: '3.11'
architecture: 'x64'
- uses: actions/download-artifact@v4
with:
name: extension-artifacts-3.11
- name: Install and Test
run: |
set -eux
# Remove NodeJS, twice to take care of system and locally installed node versions.
sudo rm -rf $(which node)
sudo rm -rf $(which node)
pip install "jupyterlab>=4.0.0,<5" tvbextunicore*.whl
jupyter server extension list 2>&1 | grep -ie "tvbextunicore.*OK"
jupyter labextension list 2>&1 | grep -ie "tvb-ext-unicore.*OK"
python -m jupyterlab.browser_check --no-browser-test