Merge pull request #95 from svalinn/gh-action

Modify and Update CI Testing

.github/workflows/docker_publish.yml

@@ -0,0 +1,60 @@
+name: Build & publish Docker image for ParaStell CI
+
+on:
+  # allows us to run workflows manually
+  workflow_dispatch:
+  push:
+    paths:
+      - 'Dockerfile'
+      - '.github/workflows/docker_publish.yml'
+
+jobs:
+  build-dependency-img:
+    runs-on: ubuntu-latest
+
+    name: Install Dependencies
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v4
+
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Log into GitHub Container Registry
+        uses: docker/login-action@v3
+        with:
+          registry: ghcr.io
+          username: ${{ github.repository_owner }}
+          password: ${{ secrets.GITHUB_TOKEN }}
+
+      - name: Build and push ParaStell Docker image
+        id: build-parastell
+        uses: docker/build-push-action@v5
+        with:
+          cache-from: type=registry,ref=ghcr.io/svalinn/parastell:ci-layer-cache
+          cache-to: type=registry,ref=ghcr.io/svalinn/parastell:ci-layer-cache,mode=max
+          file: Dockerfile
+          push: true
+          target: parastell-deps
+          tags: ghcr.io/svalinn/parastell-ci
+
+  test-dependency-img:
+    needs: build-dependency-img
+    runs-on: ubuntu-latest
+    container: ghcr.io/svalinn/parastell-ci
+
+    name: Test CI Image
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v4
+
+      - name: Populate environment and run tests
+        run: |
+          . /opt/etc/bashrc
+          sed -e "s/@SERVER@/${rlmSERVER}/" -e "s/@PASSWORD@/${rlmPASSWD}/" /opt/Coreform-Cubit-2023.11/bin/licenses/rlmcloud.in > /opt/Coreform-Cubit-2023.11/bin/licenses/rlmcloud.lic
+          export PYTHONPATH=${PYTHONPATH}:`pwd`
+          cd tests
+          pytest -v .
+        env:
+          rlmSERVER: ${{ secrets.RLMSERVER }}
+          rlmPASSWD: ${{ secrets.RLMPASSWORD }}

dockerfile → Dockerfile

@@ -1,11 +1,11 @@
-FROM continuumio/miniconda3
+FROM continuumio/miniconda3 as parastell-deps
 
 ENV TZ=America/Chicago
 RUN ln -snf /usr/share/zoneinfo/$TZ /etc/localtime && echo $TZ > /etc/timezone
 RUN apt-get update -y
 RUN apt-get upgrade -y
 
-# install dependencies
+# Install dependencies
 RUN apt-get install -y libgl1-mesa-glx \
                         libgl1-mesa-dev \
                         libglu1-mesa-dev \
@@ -30,27 +30,26 @@ RUN apt-get install -y libgl1-mesa-glx \
                         libxcursor1 \
                         libxinerama1
 
-# download cubit
+# Download Coreform Cubit
 RUN wget -O /cubit.deb https://f002.backblazeb2.com/file/cubit-downloads/Coreform-Cubit/Releases/Linux/Coreform-Cubit-2023.11%2B43088-Lin64.deb
 
-# install cubit
+# Install Cubit
 RUN dpkg -i cubit.deb
 ENV PYTHONPATH=/opt/Coreform-Cubit-2023.11/bin/
+COPY ./rlmcloud.in /opt/Coreform-Cubit-2023.11/bin/licenses/rlmcloud.in
 
-# parastell env
+RUN mkdir -p /opt/etc
+RUN cp /root/.bashrc /opt/etc/bashrc
+
+# Install Python dependencies in parastell env conda environment
 COPY ./environment.yml /environment.yml
 RUN conda env create -f environment.yml
-RUN echo "source activate parastell_env" >> ~/.bashrc
+RUN echo "conda activate parastell_env" >> /opt/etc/bashrc
 
 WORKDIR /opt
 
-# install pystell_uw
+# Install PyStell-UW
 RUN git clone https://github.com/aaroncbader/pystell_uw.git
 ENV PYTHONPATH=$PYTHONPATH:/opt/pystell_uw
 
-# install parastell
-RUN git clone https://github.com/svalinn/parastell.git
-ENV PYTHONPATH=$PYTHONPATH:/opt/parastell
-
 WORKDIR /
-

rlmcloud.in

@@ -0,0 +1,5 @@
+#
+# Ports 5053 and 5132 must be open in your firewall for outgoing connections.
+#
+CUSTOMER Wisc isv=csimsoft server=@SERVER@ port=5053 password=@PASSWORD@
+