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README.md
README.md
 
 
abyss-explorer.rb
abyss-explorer.rb
 
 
abyss.rb
abyss.rb
 
 
adol-c.rb
adol-c.rb
 
 
alembic.rb
alembic.rb
 
 
allpaths-lg.rb
allpaths-lg.rb
 
 
amos.rb
amos.rb
 
 
analysis.rb
analysis.rb
 
 
ann.rb
ann.rb
 
 
aragorn.rb
aragorn.rb
 
 
armadillo.rb
armadillo.rb
 
 
arow++.rb
arow++.rb
 
 
arpack.rb
arpack.rb
 
 
asl.rb
asl.rb
 
 
astrometry.net.rb
astrometry.net.rb
 
 
atlas.rb
atlas.rb
 
 
augustus.rb
augustus.rb
 
 
bact.rb
bact.rb
 
 
bali-phy.rb
bali-phy.rb
 
 
bam-readcount.rb
bam-readcount.rb
 
 
bamtools.rb
bamtools.rb
 
 
bamutil.rb
bamutil.rb
 
 
bcftools.rb
bcftools.rb
 
 
beagle.rb
beagle.rb
 
 
beast.rb
beast.rb
 
 
bedops.rb
bedops.rb
 
 
bedtools.rb
bedtools.rb
 
 
beetl.rb
beetl.rb
 
 
bioawk.rb
bioawk.rb
 
 
biocgal.rb
biocgal.rb
 
 
biopieces.rb
biopieces.rb
 
 
bitseq.rb
bitseq.rb
 
 
blasr.rb
blasr.rb
 
 
blast.rb
blast.rb
 
 
blat.rb
blat.rb
 
 
bowtie.rb
bowtie.rb
 
 
bowtie2.rb
bowtie2.rb
 
 
bpel2owfn.rb
bpel2owfn.rb
 
 
bwa.rb
bwa.rb
 
 
bwtdisk.rb
bwtdisk.rb
 
 
cap3.rb
cap3.rb
 
 
cd-hit.rb
cd-hit.rb
 
 
cddlib.rb
cddlib.rb
 
 
cdo.rb
cdo.rb
 
 
cdsclient.rb
cdsclient.rb
 
 
cegma.rb
cegma.rb
 
 
celera-assembler.rb
celera-assembler.rb
 
 
ceres-solver.rb
ceres-solver.rb
 
 
cgap.rb
cgap.rb
 
 
cgns.rb
cgns.rb
 
 
circos.rb
circos.rb
 
 
clustal-omega.rb
clustal-omega.rb
 
 
clustal-w.rb
clustal-w.rb
 
 
cminpack.rb
cminpack.rb
 
 
coinmp.rb
coinmp.rb
 
 
coinutils.rb
coinutils.rb
 
 
colpack.rb
colpack.rb
 
 
cppad.rb
cppad.rb
 
 
crfsuite.rb
crfsuite.rb
 
 
cufflinks.rb
cufflinks.rb
 
 
dadadodo.rb
dadadodo.rb
 
 
data-science-toolbox.rb
data-science-toolbox.rb
 
 
delly.rb
delly.rb
 
 
dsk.rb
dsk.rb
 
 
dssp.rb
dssp.rb
 
 
edena.rb
edena.rb
 
 
edirect.rb
edirect.rb
 
 
elph.rb
elph.rb
 
 
emboss.rb
emboss.rb
 
 
enblend-enfuse.rb
enblend-enfuse.rb
 
 
ensembl-tools.rb
ensembl-tools.rb
 
 
exonerate.rb
exonerate.rb
 
 
fann.rb
fann.rb
 
 
fast-statistical-alignment.rb
fast-statistical-alignment.rb
 
 
fasta.rb
fasta.rb
 
 
fastqc.rb
fastqc.rb
 
 
fasttree.rb
fasttree.rb
 
 
fastx_toolkit.rb
fastx_toolkit.rb
 
 
fermi.rb
fermi.rb
 
 
field3d.rb
field3d.rb
 
 
flann.rb
flann.rb
 
 
fwdpp.rb
fwdpp.rb
 
 
gaemr.rb
gaemr.rb
 
 
gal-sim.rb
gal-sim.rb
 
 
galib.rb
galib.rb
 
 
gdcm.rb
gdcm.rb
 
 
geant.rb
geant.rb
 
 
geneid.rb
geneid.rb
 
 
genet.rb
genet.rb
 
 
genewise.rb
genewise.rb
 
 
genometools.rb
genometools.rb
 
 
gfan.rb
gfan.rb
 
 
giira.rb
giira.rb
 
 
glimmer3.rb
glimmer3.rb
 
 
glpk.rb
glpk.rb
 
 
gmap-gsnap.rb
gmap-gsnap.rb
 
 
gmcloser.rb
gmcloser.rb
 
 
gmt.rb
gmt.rb
 
 
gmt4.rb
gmt4.rb
 
 
graph-tool.rb
graph-tool.rb
 
 

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Homebrew-science

For science.

These formulae provide software tailored to scientific endeavors. Need to store large amounts of data in a sparse matrix, solve a huge optimization problem or process the images from your space telescope? Maybe we can help!

How do I install these formulae?

Just brew tap homebrew/science and then brew install <formula>.

If the formula conflicts with one from mxcl/master or another tap, you can brew install homebrew/science/<formula>.

You can also install via URL:

brew install https://raw.github.com/Homebrew/homebrew-science/master/<formula>.rb

Docs

brew help, man brew, or the Homebrew wiki.

Contributing

Please see the contributing wiki page.

About

Scientific formulae for the Homebrew package manager

mxcl.github.com/homebrew

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Readme
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