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Merge pull request #86 from superphy/rc6.3.0
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edit: "accession"
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kevinkle authored Jun 22, 2018
2 parents 33525bc + bbd16b4 commit 51c8d71
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7 changes: 5 additions & 2 deletions src/containers/Search.js
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Expand Up @@ -76,7 +76,10 @@ class Search extends Component {
We use the <a href='https://biopython.org/wiki/SeqIO'>SeqIO </a>
library to parse the identifiers from an isolate.
Specifically, we use the record.id which uses the combined
gi gb accession numbers.
gi gb accession numbers. If an isolate is comprised of multiple
contiguous DNA sequences, searching for any accession in the isolate
will return results for all sequences in the isolate along with
the associated contig id.
</p>
<p>
For example, a <b>GenBank</b> record:
Expand Down Expand Up @@ -115,7 +118,7 @@ class Search extends Component {
</div>
{/* End: Help Text */}
<div className="md-cell md-cell--12">
<h5>Search By record.id</h5>
<h5>Search By accession</h5>
<TextField
id="st"
value={st}
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4 changes: 2 additions & 2 deletions src/middleware/api.js
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Expand Up @@ -35,9 +35,9 @@ export const analyses = [
'text':'Select groups from uploaded genomes & compare for a chosen target datum.'
},{
'analysis': 'search',
'pseudonym': 'search by record.id',
'pseudonym': 'search by accession',
'description': (
<p style={{ color: 'gray' }}>Search database results by record.id</p>
<p style={{ color: 'gray' }}>Search database results by accession</p>
),
'text': ''
},
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