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rearrange queried_values_by_layer for merkle. #7879

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Run time

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Job	Run time
run-wasm32-unknown-tests	40s
clippy	19s
doc	41s
format	16s
run-wasm32-wasi-tests	49s
run-avx512-bench	17m 51s
run-avx-tests (avx512f)	59s
run-avx-tests (avx2)	1m 47s
run-neon-tests	36s
machete	21s
run-avx512-bench-parallel	17m 21s
run-slow-tests	57s
run-tests	38s
run-tests-parallel	42s
all-tests	0s
	43m 57s