Initialize backend

backend/Gemfile

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+source 'https://rubygems.org'
+
+
+gem 'rails', '4.2.4'
+
+gem 'rails-api'
+
+gem 'spring', :group => :development
+
+
+gem 'sqlite3'
+
+gem 'rack-cors'
+
+
+# To use ActiveModel has_secure_password
+# gem 'bcrypt', '~> 3.1.7'
+
+# To use Jbuilder templates for JSON
+# gem 'jbuilder'
+
+# Use unicorn as the app server
+# gem 'unicorn'
+
+# Deploy with Capistrano
+# gem 'capistrano', :group => :development
+
+# To use debugger
+# gem 'ruby-debug19', :require => 'ruby-debug'

backend/Gemfile.lock

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+GEM
+  remote: https://rubygems.org/
+  specs:
+    actionmailer (4.2.4)
+      actionpack (= 4.2.4)
+      actionview (= 4.2.4)
+      activejob (= 4.2.4)
+      mail (~> 2.5, >= 2.5.4)
+      rails-dom-testing (~> 1.0, >= 1.0.5)
+    actionpack (4.2.4)
+      actionview (= 4.2.4)
+      activesupport (= 4.2.4)
+      rack (~> 1.6)
+      rack-test (~> 0.6.2)
+      rails-dom-testing (~> 1.0, >= 1.0.5)
+      rails-html-sanitizer (~> 1.0, >= 1.0.2)
+    actionview (4.2.4)
+      activesupport (= 4.2.4)
+      builder (~> 3.1)
+      erubis (~> 2.7.0)
+      rails-dom-testing (~> 1.0, >= 1.0.5)
+      rails-html-sanitizer (~> 1.0, >= 1.0.2)
+    activejob (4.2.4)
+      activesupport (= 4.2.4)
+      globalid (>= 0.3.0)
+    activemodel (4.2.4)
+      activesupport (= 4.2.4)
+      builder (~> 3.1)
+    activerecord (4.2.4)
+      activemodel (= 4.2.4)
+      activesupport (= 4.2.4)
+      arel (~> 6.0)
+    activesupport (4.2.4)
+      i18n (~> 0.7)
+      json (~> 1.7, >= 1.7.7)
+      minitest (~> 5.1)
+      thread_safe (~> 0.3, >= 0.3.4)
+      tzinfo (~> 1.1)
+    arel (6.0.3)
+    builder (3.2.2)
+    concurrent-ruby (1.0.0)
+    erubis (2.7.0)
+    globalid (0.3.6)
+      activesupport (>= 4.1.0)
+    i18n (0.7.0)
+    json (1.8.3)
+    loofah (2.0.3)
+      nokogiri (>= 1.5.9)
+    mail (2.6.3)
+      mime-types (>= 1.16, < 3)
+    mime-types (2.99)
+    mini_portile2 (2.0.0)
+    minitest (5.8.4)
+    nokogiri (1.6.7.2)
+      mini_portile2 (~> 2.0.0.rc2)
+    rack (1.6.4)
+    rack-cors (0.4.0)
+    rack-test (0.6.3)
+      rack (>= 1.0)
+    rails (4.2.4)
+      actionmailer (= 4.2.4)
+      actionpack (= 4.2.4)
+      actionview (= 4.2.4)
+      activejob (= 4.2.4)
+      activemodel (= 4.2.4)
+      activerecord (= 4.2.4)
+      activesupport (= 4.2.4)
+      bundler (>= 1.3.0, < 2.0)
+      railties (= 4.2.4)
+      sprockets-rails
+    rails-api (0.4.0)
+      actionpack (>= 3.2.11)
+      railties (>= 3.2.11)
+    rails-deprecated_sanitizer (1.0.3)
+      activesupport (>= 4.2.0.alpha)
+    rails-dom-testing (1.0.7)
+      activesupport (>= 4.2.0.beta, < 5.0)
+      nokogiri (~> 1.6.0)
+      rails-deprecated_sanitizer (>= 1.0.1)
+    rails-html-sanitizer (1.0.3)
+      loofah (~> 2.0)
+    railties (4.2.4)
+      actionpack (= 4.2.4)
+      activesupport (= 4.2.4)
+      rake (>= 0.8.7)
+      thor (>= 0.18.1, < 2.0)
+    rake (10.5.0)
+    spring (1.6.3)
+    sprockets (3.5.2)
+      concurrent-ruby (~> 1.0)
+      rack (> 1, < 3)
+    sprockets-rails (3.0.1)
+      actionpack (>= 4.0)
+      activesupport (>= 4.0)
+      sprockets (>= 3.0.0)
+    sqlite3 (1.3.11)
+    thor (0.19.1)
+    thread_safe (0.3.5)
+    tzinfo (1.2.2)
+      thread_safe (~> 0.1)
+
+PLATFORMS
+  ruby
+
+DEPENDENCIES
+  rack-cors
+  rails (= 4.2.4)
+  rails-api
+  spring
+  sqlite3
+
+BUNDLED WITH
+   1.11.2

backend/README.rdoc

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+== README
+
+This README would normally document whatever steps are necessary to get the
+application up and running.
+
+Things you may want to cover:
+
+* Ruby version
+
+* System dependencies
+
+* Configuration
+
+* Database creation
+
+* Database initialization
+
+* How to run the test suite
+
+* Services (job queues, cache servers, search engines, etc.)
+
+* Deployment instructions
+
+* ...
+
+
+Please feel free to use a different markup language if you do not plan to run
+<tt>rake doc:app</tt>.

backend/Rakefile

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+# Add your own tasks in files placed in lib/tasks ending in .rake,
+# for example lib/tasks/capistrano.rake, and they will automatically be available to Rake.
+
+require File.expand_path('../config/application', __FILE__)
+
+Rails.application.load_tasks

backend/app/controllers/application_controller.rb

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+class ApplicationController < ActionController::API
+end

backend/bin/bundle

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+#!/usr/bin/env ruby
+ENV['BUNDLE_GEMFILE'] ||= File.expand_path('../../Gemfile', __FILE__)
+load Gem.bin_path('bundler', 'bundle')

backend/bin/rails

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+#!/usr/bin/env ruby
+begin
+  load File.expand_path('../spring', __FILE__)
+rescue LoadError => e
+  raise unless e.message.include?('spring')
+end
+APP_PATH = File.expand_path('../../config/application', __FILE__)
+require_relative '../config/boot'
+require 'rails/commands'

backend/bin/rake

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+#!/usr/bin/env ruby
+begin
+  load File.expand_path('../spring', __FILE__)
+rescue LoadError => e
+  raise unless e.message.include?('spring')
+end
+require_relative '../config/boot'
+require 'rake'
+Rake.application.run

backend/bin/setup

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+#!/usr/bin/env ruby
+require 'pathname'
+
+# path to your application root.
+APP_ROOT = Pathname.new File.expand_path('../../',  __FILE__)
+
+Dir.chdir APP_ROOT do
+  # This script is a starting point to setup your application.
+  # Add necessary setup steps to this file:
+
+  puts "== Installing dependencies =="
+  system "gem install bundler --conservative"
+  system "bundle check || bundle install"
+
+  # puts "\n== Copying sample files =="
+  # unless File.exist?("config/database.yml")
+  #   system "cp config/database.yml.sample config/database.yml"
+  # end
+
+  puts "\n== Preparing database =="
+  system "bin/rake db:setup"
+
+  puts "\n== Removing old logs and tempfiles =="
+  system "rm -f log/*"
+  system "rm -rf tmp/cache"
+
+  puts "\n== Restarting application server =="
+  system "touch tmp/restart.txt"
+end

backend/bin/spring

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+#!/usr/bin/env ruby
+
+# This file loads spring without using Bundler, in order to be fast.
+# It gets overwritten when you run the `spring binstub` command.
+
+unless defined?(Spring)
+  require 'rubygems'
+  require 'bundler'
+
+  if (match = Bundler.default_lockfile.read.match(/^GEM$.*?^    (?:  )*spring \((.*?)\)$.*?^$/m))
+    Gem.paths = { 'GEM_PATH' => [Bundler.bundle_path.to_s, *Gem.path].uniq }
+    gem 'spring', match[1]
+    require 'spring/binstub'
+  end
+end

backend/config.ru

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+# This file is used by Rack-based servers to start the application.
+
+require ::File.expand_path('../config/environment', __FILE__)
+run Rails.application

backend/config/application.rb

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+require File.expand_path('../boot', __FILE__)
+
+require "rails"
+# Pick the frameworks you want:
+require "active_model/railtie"
+require "active_job/railtie"
+require "active_record/railtie"
+require "action_controller/railtie"
+require "action_mailer/railtie"
+require "action_view/railtie"
+# require "sprockets/railtie"
+# require "rails/test_unit/railtie"
+
+# Require the gems listed in Gemfile, including any gems
+# you've limited to :test, :development, or :production.
+Bundler.require(*Rails.groups)
+
+module ChemistryGenealogy
+  class Application < Rails::Application
+    # Settings in config/environments/* take precedence over those specified here.
+    # Application configuration should go into files in config/initializers
+    # -- all .rb files in that directory are automatically loaded.
+
+    # Set Time.zone default to the specified zone and make Active Record auto-convert to this zone.
+    # Run "rake -D time" for a list of tasks for finding time zone names. Default is UTC.
+    # config.time_zone = 'Central Time (US & Canada)'
+
+    # The default locale is :en and all translations from config/locales/*.rb,yml are auto loaded.
+    # config.i18n.load_path += Dir[Rails.root.join('my', 'locales', '*.{rb,yml}').to_s]
+    # config.i18n.default_locale = :de
+
+    # Do not swallow errors in after_commit/after_rollback callbacks.
+    config.active_record.raise_in_transactional_callbacks = true
+  end
+end

backend/config/boot.rb

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+ENV['BUNDLE_GEMFILE'] ||= File.expand_path('../../Gemfile', __FILE__)
+
+require 'bundler/setup' # Set up gems listed in the Gemfile.

backend/config/database.yml

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+# SQLite version 3.x
+#   gem install sqlite3
+#
+#   Ensure the SQLite 3 gem is defined in your Gemfile
+#   gem 'sqlite3'
+#
+default: &default
+  adapter: sqlite3
+  pool: 5
+  timeout: 5000
+
+development:
+  <<: *default
+  database: db/development.sqlite3
+
+# Warning: The database defined as "test" will be erased and
+# re-generated from your development database when you run "rake".
+# Do not set this db to the same as development or production.
+test:
+  <<: *default
+  database: db/test.sqlite3
+
+production:
+  <<: *default
+  database: db/production.sqlite3

backend/config/environment.rb

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+# Load the Rails application.
+require File.expand_path('../application', __FILE__)
+
+# Initialize the Rails application.
+Rails.application.initialize!

backend/config/environments/development.rb

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+Rails.application.configure do
+  # Settings specified here will take precedence over those in config/application.rb.
+
+  # In the development environment your application's code is reloaded on
+  # every request. This slows down response time but is perfect for development
+  # since you don't have to restart the web server when you make code changes.
+  config.cache_classes = false
+
+  # Do not eager load code on boot.
+  config.eager_load = false
+
+  # Show full error reports and disable caching.
+  config.consider_all_requests_local       = true
+  config.action_controller.perform_caching = false
+
+  # Don't care if the mailer can't send.
+  config.action_mailer.raise_delivery_errors = false
+
+  # Print deprecation notices to the Rails logger.
+  config.active_support.deprecation = :log
+
+  # Raise an error on page load if there are pending migrations.
+  config.active_record.migration_error = :page_load
+
+
+  # Raises error for missing translations
+  # config.action_view.raise_on_missing_translations = true
+
+  # Removes the CORS problem from running on two ports
+  # From: http://rockyj.in/2013/10/24/angular_rails.html
+  config.middleware.use Rack::Cors do
+    allow do
+      origins 'localhost:9000'
+      resource '*', :headers => :any, :methods => [:get, :post, :options, :delete]
+    end
+  end
+
+end

backend/config/environments/development.rb~

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+Rails.application.configure do
+  # Settings specified here will take precedence over those in config/application.rb.
+
+  # In the development environment your application's code is reloaded on
+  # every request. This slows down response time but is perfect for development
+  # since you don't have to restart the web server when you make code changes.
+  config.cache_classes = false
+
+  # Do not eager load code on boot.
+  config.eager_load = false
+
+  # Show full error reports and disable caching.
+  config.consider_all_requests_local       = true
+  config.action_controller.perform_caching = false
+
+  # Don't care if the mailer can't send.
+  config.action_mailer.raise_delivery_errors = false
+
+  # Print deprecation notices to the Rails logger.
+  config.active_support.deprecation = :log
+
+  # Raise an error on page load if there are pending migrations.
+  config.active_record.migration_error = :page_load
+
+
+  # Raises error for missing translations
+  # config.action_view.raise_on_missing_translations = true
+end