Skip to content

Commit

Permalink
Deployed 1ee6f25 to 2024.4 with MkDocs 1.5.3 and mike 2.0.0
Browse files Browse the repository at this point in the history
  • Loading branch information
Geert van Geest committed Aug 28, 2024
1 parent 17c167d commit fde6a96
Show file tree
Hide file tree
Showing 15 changed files with 322 additions and 112 deletions.
31 changes: 23 additions & 8 deletions 2024.4/404.html
Original file line number Diff line number Diff line change
Expand Up @@ -44,16 +44,31 @@

<script>__md_scope=new URL("/",location),__md_hash=e=>[...e].reduce((e,_)=>(e<<5)-e+_.charCodeAt(0),0),__md_get=(e,_=localStorage,t=__md_scope)=>JSON.parse(_.getItem(t.pathname+"."+e)),__md_set=(e,_,t=localStorage,a=__md_scope)=>{try{t.setItem(a.pathname+"."+e,JSON.stringify(_))}catch(e){}}</script>

<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-YX61LNKWGY"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());



gtag('config', 'G-YX61LNKWGY');
</script>


<!-- Matomo -->
<script>
var _paq = window._paq = window._paq || [];
/* tracker methods like "setCustomDimension" should be called before "trackPageView" */
_paq.push(['trackPageView']);
_paq.push(['enableLinkTracking']);
(function() {
var u="https://matomo.sib.swiss/";
_paq.push(['setTrackerUrl', u+'matomo.php']);
_paq.push(['setSiteId', '220']);
var d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];
g.async=true; g.src=u+'matomo.js'; s.parentNode.insertBefore(g,s);
})();
</script>
<!-- End Matomo Code -->

<script>"undefined"!=typeof __md_analytics&&__md_analytics()</script>





<meta property="og:url" content="https://sib-swiss.github.io/NGS-introduction-training/latest/" />
Expand Down
31 changes: 23 additions & 8 deletions 2024.4/course_schedule/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -48,16 +48,31 @@

<script>__md_scope=new URL("..",location),__md_hash=e=>[...e].reduce((e,_)=>(e<<5)-e+_.charCodeAt(0),0),__md_get=(e,_=localStorage,t=__md_scope)=>JSON.parse(_.getItem(t.pathname+"."+e)),__md_set=(e,_,t=localStorage,a=__md_scope)=>{try{t.setItem(a.pathname+"."+e,JSON.stringify(_))}catch(e){}}</script>

<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-YX61LNKWGY"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());



gtag('config', 'G-YX61LNKWGY');
</script>


<!-- Matomo -->
<script>
var _paq = window._paq = window._paq || [];
/* tracker methods like "setCustomDimension" should be called before "trackPageView" */
_paq.push(['trackPageView']);
_paq.push(['enableLinkTracking']);
(function() {
var u="https://matomo.sib.swiss/";
_paq.push(['setTrackerUrl', u+'matomo.php']);
_paq.push(['setSiteId', '220']);
var d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];
g.async=true; g.src=u+'matomo.js'; s.parentNode.insertBefore(g,s);
})();
</script>
<!-- End Matomo Code -->

<script>"undefined"!=typeof __md_analytics&&__md_analytics()</script>





<meta property="og:url" content="https://sib-swiss.github.io/NGS-introduction-training/latest/" />
Expand Down
31 changes: 23 additions & 8 deletions 2024.4/day1/intro/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -48,16 +48,31 @@

<script>__md_scope=new URL("../..",location),__md_hash=e=>[...e].reduce((e,_)=>(e<<5)-e+_.charCodeAt(0),0),__md_get=(e,_=localStorage,t=__md_scope)=>JSON.parse(_.getItem(t.pathname+"."+e)),__md_set=(e,_,t=localStorage,a=__md_scope)=>{try{t.setItem(a.pathname+"."+e,JSON.stringify(_))}catch(e){}}</script>

<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-YX61LNKWGY"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());



gtag('config', 'G-YX61LNKWGY');
</script>


<!-- Matomo -->
<script>
var _paq = window._paq = window._paq || [];
/* tracker methods like "setCustomDimension" should be called before "trackPageView" */
_paq.push(['trackPageView']);
_paq.push(['enableLinkTracking']);
(function() {
var u="https://matomo.sib.swiss/";
_paq.push(['setTrackerUrl', u+'matomo.php']);
_paq.push(['setSiteId', '220']);
var d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];
g.async=true; g.src=u+'matomo.js'; s.parentNode.insertBefore(g,s);
})();
</script>
<!-- End Matomo Code -->

<script>"undefined"!=typeof __md_analytics&&__md_analytics()</script>





<meta property="og:url" content="https://sib-swiss.github.io/NGS-introduction-training/latest/" />
Expand Down
31 changes: 23 additions & 8 deletions 2024.4/day1/quality_control/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -48,18 +48,33 @@

<script>__md_scope=new URL("../..",location),__md_hash=e=>[...e].reduce((e,_)=>(e<<5)-e+_.charCodeAt(0),0),__md_get=(e,_=localStorage,t=__md_scope)=>JSON.parse(_.getItem(t.pathname+"."+e)),__md_set=(e,_,t=localStorage,a=__md_scope)=>{try{t.setItem(a.pathname+"."+e,JSON.stringify(_))}catch(e){}}</script>

<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-YX61LNKWGY"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());




gtag('config', 'G-YX61LNKWGY');
</script>

<!-- Matomo -->
<script>
var _paq = window._paq = window._paq || [];
/* tracker methods like "setCustomDimension" should be called before "trackPageView" */
_paq.push(['trackPageView']);
_paq.push(['enableLinkTracking']);
(function() {
var u="https://matomo.sib.swiss/";
_paq.push(['setTrackerUrl', u+'matomo.php']);
_paq.push(['setSiteId', '220']);
var d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];
g.async=true; g.src=u+'matomo.js'; s.parentNode.insertBefore(g,s);
})();
</script>
<!-- End Matomo Code -->

<script>"undefined"!=typeof __md_analytics&&__md_analytics()</script>





<meta property="og:url" content="https://sib-swiss.github.io/NGS-introduction-training/latest/" />
<meta property="og:title" content="NGS - Quality Control, Alignment, Visualisation" />
<meta property="og:description" content="Course on the introduction to next generation sequencing analysis" />
Expand Down
31 changes: 23 additions & 8 deletions 2024.4/day1/reproducibility/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -48,16 +48,31 @@

<script>__md_scope=new URL("../..",location),__md_hash=e=>[...e].reduce((e,_)=>(e<<5)-e+_.charCodeAt(0),0),__md_get=(e,_=localStorage,t=__md_scope)=>JSON.parse(_.getItem(t.pathname+"."+e)),__md_set=(e,_,t=localStorage,a=__md_scope)=>{try{t.setItem(a.pathname+"."+e,JSON.stringify(_))}catch(e){}}</script>

<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-YX61LNKWGY"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());



gtag('config', 'G-YX61LNKWGY');
</script>


<!-- Matomo -->
<script>
var _paq = window._paq = window._paq || [];
/* tracker methods like "setCustomDimension" should be called before "trackPageView" */
_paq.push(['trackPageView']);
_paq.push(['enableLinkTracking']);
(function() {
var u="https://matomo.sib.swiss/";
_paq.push(['setTrackerUrl', u+'matomo.php']);
_paq.push(['setSiteId', '220']);
var d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];
g.async=true; g.src=u+'matomo.js'; s.parentNode.insertBefore(g,s);
})();
</script>
<!-- End Matomo Code -->

<script>"undefined"!=typeof __md_analytics&&__md_analytics()</script>





<meta property="og:url" content="https://sib-swiss.github.io/NGS-introduction-training/latest/" />
Expand Down
31 changes: 23 additions & 8 deletions 2024.4/day1/sequencing_technologies/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -48,16 +48,31 @@

<script>__md_scope=new URL("../..",location),__md_hash=e=>[...e].reduce((e,_)=>(e<<5)-e+_.charCodeAt(0),0),__md_get=(e,_=localStorage,t=__md_scope)=>JSON.parse(_.getItem(t.pathname+"."+e)),__md_set=(e,_,t=localStorage,a=__md_scope)=>{try{t.setItem(a.pathname+"."+e,JSON.stringify(_))}catch(e){}}</script>

<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-YX61LNKWGY"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());



gtag('config', 'G-YX61LNKWGY');
</script>


<!-- Matomo -->
<script>
var _paq = window._paq = window._paq || [];
/* tracker methods like "setCustomDimension" should be called before "trackPageView" */
_paq.push(['trackPageView']);
_paq.push(['enableLinkTracking']);
(function() {
var u="https://matomo.sib.swiss/";
_paq.push(['setTrackerUrl', u+'matomo.php']);
_paq.push(['setSiteId', '220']);
var d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];
g.async=true; g.src=u+'matomo.js'; s.parentNode.insertBefore(g,s);
})();
</script>
<!-- End Matomo Code -->

<script>"undefined"!=typeof __md_analytics&&__md_analytics()</script>





<meta property="og:url" content="https://sib-swiss.github.io/NGS-introduction-training/latest/" />
Expand Down
31 changes: 23 additions & 8 deletions 2024.4/day1/server_login/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -48,18 +48,33 @@

<script>__md_scope=new URL("../..",location),__md_hash=e=>[...e].reduce((e,_)=>(e<<5)-e+_.charCodeAt(0),0),__md_get=(e,_=localStorage,t=__md_scope)=>JSON.parse(_.getItem(t.pathname+"."+e)),__md_set=(e,_,t=localStorage,a=__md_scope)=>{try{t.setItem(a.pathname+"."+e,JSON.stringify(_))}catch(e){}}</script>

<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-YX61LNKWGY"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());




gtag('config', 'G-YX61LNKWGY');
</script>

<!-- Matomo -->
<script>
var _paq = window._paq = window._paq || [];
/* tracker methods like "setCustomDimension" should be called before "trackPageView" */
_paq.push(['trackPageView']);
_paq.push(['enableLinkTracking']);
(function() {
var u="https://matomo.sib.swiss/";
_paq.push(['setTrackerUrl', u+'matomo.php']);
_paq.push(['setSiteId', '220']);
var d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];
g.async=true; g.src=u+'matomo.js'; s.parentNode.insertBefore(g,s);
})();
</script>
<!-- End Matomo Code -->

<script>"undefined"!=typeof __md_analytics&&__md_analytics()</script>





<meta property="og:url" content="https://sib-swiss.github.io/NGS-introduction-training/latest/" />
<meta property="og:title" content="NGS - Quality Control, Alignment, Visualisation" />
<meta property="og:description" content="Course on the introduction to next generation sequencing analysis" />
Expand Down
31 changes: 23 additions & 8 deletions 2024.4/day2/file_types/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -48,16 +48,31 @@

<script>__md_scope=new URL("../..",location),__md_hash=e=>[...e].reduce((e,_)=>(e<<5)-e+_.charCodeAt(0),0),__md_get=(e,_=localStorage,t=__md_scope)=>JSON.parse(_.getItem(t.pathname+"."+e)),__md_set=(e,_,t=localStorage,a=__md_scope)=>{try{t.setItem(a.pathname+"."+e,JSON.stringify(_))}catch(e){}}</script>

<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-YX61LNKWGY"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());



gtag('config', 'G-YX61LNKWGY');
</script>


<!-- Matomo -->
<script>
var _paq = window._paq = window._paq || [];
/* tracker methods like "setCustomDimension" should be called before "trackPageView" */
_paq.push(['trackPageView']);
_paq.push(['enableLinkTracking']);
(function() {
var u="https://matomo.sib.swiss/";
_paq.push(['setTrackerUrl', u+'matomo.php']);
_paq.push(['setSiteId', '220']);
var d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];
g.async=true; g.src=u+'matomo.js'; s.parentNode.insertBefore(g,s);
})();
</script>
<!-- End Matomo Code -->

<script>"undefined"!=typeof __md_analytics&&__md_analytics()</script>





<meta property="og:url" content="https://sib-swiss.github.io/NGS-introduction-training/latest/" />
Expand Down
31 changes: 23 additions & 8 deletions 2024.4/day2/read_alignment/index.html
Original file line number Diff line number Diff line change
Expand Up @@ -48,16 +48,31 @@

<script>__md_scope=new URL("../..",location),__md_hash=e=>[...e].reduce((e,_)=>(e<<5)-e+_.charCodeAt(0),0),__md_get=(e,_=localStorage,t=__md_scope)=>JSON.parse(_.getItem(t.pathname+"."+e)),__md_set=(e,_,t=localStorage,a=__md_scope)=>{try{t.setItem(a.pathname+"."+e,JSON.stringify(_))}catch(e){}}</script>

<!-- Global site tag (gtag.js) - Google Analytics -->
<script async src="https://www.googletagmanager.com/gtag/js?id=G-YX61LNKWGY"></script>
<script>
window.dataLayer = window.dataLayer || [];
function gtag(){dataLayer.push(arguments);}
gtag('js', new Date());



gtag('config', 'G-YX61LNKWGY');
</script>


<!-- Matomo -->
<script>
var _paq = window._paq = window._paq || [];
/* tracker methods like "setCustomDimension" should be called before "trackPageView" */
_paq.push(['trackPageView']);
_paq.push(['enableLinkTracking']);
(function() {
var u="https://matomo.sib.swiss/";
_paq.push(['setTrackerUrl', u+'matomo.php']);
_paq.push(['setSiteId', '220']);
var d=document, g=d.createElement('script'), s=d.getElementsByTagName('script')[0];
g.async=true; g.src=u+'matomo.js'; s.parentNode.insertBefore(g,s);
})();
</script>
<!-- End Matomo Code -->

<script>"undefined"!=typeof __md_analytics&&__md_analytics()</script>





<meta property="og:url" content="https://sib-swiss.github.io/NGS-introduction-training/latest/" />
Expand Down
Loading

0 comments on commit fde6a96

Please sign in to comment.