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update links
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arnaudbore committed Apr 14, 2021
1 parent 4603e0a commit c077df9
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2 changes: 1 addition & 1 deletion source/data/install.sh
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Expand Up @@ -6,5 +6,5 @@ unzip -q tractoflow-2.2.1.zip
rm -rf tractoflow-2.2.1.zip
echo "Done: TractoFlow downloaded."
echo "Downloading TractoFlow Singularity..."
wget -q --show-progress http://scil.dinf.usherbrooke.ca/containers_list/tractoflow_2.2.1_
wget -q --show-progress http://scil.dinf.usherbrooke.ca/containers_list/tractoflow_2.2.1_b9a527_2021-04-13.sif
echo "Done: TractoFlow Singularity downloaded."
4 changes: 2 additions & 2 deletions source/installation/install.rst
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Expand Up @@ -47,7 +47,7 @@ Download the last release of the Singularity container for TractoFlow:

::

$> wget http://scil.dinf.usherbrooke.ca/containers_list/tractoflow_2.2.1
$> wget http://scil.dinf.usherbrooke.ca/containers_list/tractoflow_2.2.1_b9a527_2021-04-13.sif

For developers
##############
Expand Down Expand Up @@ -80,6 +80,6 @@ Download the last release of the Docker container for TractoFlow:

::

$> docker pull scilus/docker-tractoflow:2.2.1
$> docker pull scilus/tractoflow:2.2.1

Please see :ref:`profiles` section to use `macos` profile.
2 changes: 1 addition & 1 deletion source/pipeline/input.rst
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Expand Up @@ -6,7 +6,7 @@ Two types of input are available in TractoFlow: BIDS and an in-house structure.
BIDS parameter
--------------

We recommend to use ``dcm2bids`` (https://github.com/cbedetti/Dcm2Bids) to create BIDS datasets.
We recommend to use ``dcm2bids`` (https://github.com/unfmontreal/Dcm2Bids) to create BIDS datasets.

TractoFlow supports BIDS as input data using ``--bids YOUR_BIDS_DATASET``. TractoFlow does some verifications
before launching the processing to valide the BIDS format.
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