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2 changes: 1 addition & 1 deletion dev/.buildinfo
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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 7d2062565669c7750a381cd232c9f5a2
config: c7b6397065ba0e3c45307d3a0d6d8f75
tags: 645f666f9bcd5a90fca523b33c5a78b7
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8 changes: 0 additions & 8 deletions dev/_sources/api/skimage.morphology.rst.txt
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Expand Up @@ -54,7 +54,6 @@
skimage.morphology.remove_small_holes
skimage.morphology.remove_small_objects
skimage.morphology.skeletonize
skimage.morphology.skeletonize_3d
skimage.morphology.square
skimage.morphology.star
skimage.morphology.thin
Expand Down Expand Up @@ -373,13 +372,6 @@
------------


.. autofunction:: skimage.morphology.skeletonize_3d

.. minigallery:: skimage.morphology.skeletonize_3d

------------


.. autofunction:: skimage.morphology.square

.. minigallery:: skimage.morphology.square
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Expand Up @@ -351,7 +351,7 @@ will not work either.
interactive(children=(IntSlider(value=34, description='plane', max=59), Output()), _dom_classes=('widget-interact',))

<function explore_slices.<locals>.display_slice at 0x7b8a89dce160>
<function explore_slices.<locals>.display_slice at 0x76b05b582840>



Expand Down Expand Up @@ -473,7 +473,7 @@ slices interactively.
interactive(children=(IntSlider(value=34, description='plane', max=59), Output()), _dom_classes=('widget-interact',))

<function explore_slices.<locals>.display_slice at 0x7b8a7a6728e0>
<function explore_slices.<locals>.display_slice at 0x76b04a26efc0>



Expand Down Expand Up @@ -584,7 +584,7 @@ Note that this works in a static HTML page!

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 7.596 seconds)
**Total running time of the script:** (0 minutes 7.454 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_3d_image_processing.py:
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Expand Up @@ -148,7 +148,7 @@ The `imshow` function can display both grayscale and RGB(A) 2D images.
Clipping input data to the valid range for imshow with RGB data ([0..1] for floats or [0..255] for integers).
<matplotlib.image.AxesImage object at 0x7b8a89cdd5b0>
<matplotlib.image.AxesImage object at 0x76b05b6e22a0>
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.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 7.276 seconds)
**Total running time of the script:** (0 minutes 7.047 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_3d_interaction.py:
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.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 1.270 seconds)
**Total running time of the script:** (0 minutes 1.251 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_3d_structure_tensor.py:
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.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 1.710 seconds)
**Total running time of the script:** (0 minutes 1.717 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_coins_segmentation.py:
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.. code-block:: none
0.20947391025251677
0.19120816339471217
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.. code-block:: none
PCC: 0.862, p-val: 0
PCC: 0.853, p-val: 0
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.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 1.466 seconds)
**Total running time of the script:** (0 minutes 1.305 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_colocalization_metrics.py:
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.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 17.638 seconds)
**Total running time of the script:** (0 minutes 18.007 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_cornea_spot_inpainting.py:
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Expand Up @@ -615,7 +615,7 @@ time points, and then becomes roughly constant.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 1.716 seconds)
**Total running time of the script:** (0 minutes 1.832 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_fluorescence_nuclear_envelope.py:
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Expand Up @@ -281,15 +281,15 @@ Once the features are extracted, we can train and test a new classifier.

.. code-block:: none
Computing the full feature set took 33.440s, plus 1.719s training, for an AUC of 1.00. Computing the restricted feature set took 0.101s, plus 1.468s training, for an AUC of 1.00.
Computing the full feature set took 33.465s, plus 1.699s training, for an AUC of 1.00. Computing the restricted feature set took 0.099s, plus 1.490s training, for an AUC of 1.00.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 39.149 seconds)
**Total running time of the script:** (0 minutes 39.298 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_haar_extraction_selection_classification.py:
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Expand Up @@ -504,7 +504,7 @@ cells in this sample. Therefore, we estimate the mitotic index to be:
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 2.657 seconds)
**Total running time of the script:** (0 minutes 2.636 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_human_mitosis.py:
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Expand Up @@ -202,7 +202,7 @@ Blend
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 2.127 seconds)
**Total running time of the script:** (0 minutes 2.131 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_image_comparison.py:
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Expand Up @@ -70,7 +70,7 @@ functions only work on gray-scale or binary images, so we set ``as_gray=True``.
.. code-block:: none
<matplotlib.image.AxesImage object at 0x7b8a89de4bc0>
<matplotlib.image.AxesImage object at 0x76b04a6d1760>
Expand Down Expand Up @@ -464,7 +464,7 @@ Additional Resources
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 1.581 seconds)
**Total running time of the script:** (0 minutes 1.413 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_morphology.py:
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Expand Up @@ -198,7 +198,7 @@ to the position of the centroid!

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 59.674 seconds)
**Total running time of the script:** (0 minutes 58.536 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_pixel_graphs.py:
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Expand Up @@ -1104,7 +1104,7 @@ on increasing image size:

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 40.140 seconds)
**Total running time of the script:** (0 minutes 40.281 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_rank_filters.py:
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Expand Up @@ -515,7 +515,7 @@ polynomial to the scatter plot. The velocity is the first-order coefficient.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 2.953 seconds)
**Total running time of the script:** (0 minutes 2.654 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_solidification_tracking.py:
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Expand Up @@ -353,7 +353,7 @@ The example compares the local threshold with the global threshold.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 2.956 seconds)
**Total running time of the script:** (0 minutes 3.100 seconds)


.. _sphx_glr_download_auto_examples_applications_plot_thresholding_guide.py:
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32 changes: 16 additions & 16 deletions dev/_sources/auto_examples/applications/sg_execution_times.rst.txt
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Expand Up @@ -6,7 +6,7 @@

Computation times
=================
**03:11.072** total execution time for 17 files **from auto_examples/applications**:
**03:09.825** total execution time for 17 files **from auto_examples/applications**:

.. container::

Expand All @@ -33,49 +33,49 @@ Computation times
- Time
- Mem (MB)
* - :ref:`sphx_glr_auto_examples_applications_plot_pixel_graphs.py` (``plot_pixel_graphs.py``)
- 00:59.674
- 00:58.536
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_rank_filters.py` (``plot_rank_filters.py``)
- 00:40.140
- 00:40.281
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_haar_extraction_selection_classification.py` (``plot_haar_extraction_selection_classification.py``)
- 00:39.149
- 00:39.298
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_cornea_spot_inpainting.py` (``plot_cornea_spot_inpainting.py``)
- 00:17.638
- 00:18.007
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_3d_image_processing.py` (``plot_3d_image_processing.py``)
- 00:07.596
- 00:07.454
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_3d_interaction.py` (``plot_3d_interaction.py``)
- 00:07.276
- 00:07.047
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_thresholding_guide.py` (``plot_thresholding_guide.py``)
- 00:02.956
- 00:03.100
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_solidification_tracking.py` (``plot_solidification_tracking.py``)
- 00:02.953
- 00:02.654
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_human_mitosis.py` (``plot_human_mitosis.py``)
- 00:02.657
- 00:02.636
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_image_comparison.py` (``plot_image_comparison.py``)
- 00:02.127
- 00:02.131
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_fluorescence_nuclear_envelope.py` (``plot_fluorescence_nuclear_envelope.py``)
- 00:01.716
- 00:01.832
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_coins_segmentation.py` (``plot_coins_segmentation.py``)
- 00:01.710
- 00:01.717
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_morphology.py` (``plot_morphology.py``)
- 00:01.581
- 00:01.413
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_colocalization_metrics.py` (``plot_colocalization_metrics.py``)
- 00:01.466
- 00:01.305
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_3d_structure_tensor.py` (``plot_3d_structure_tensor.py``)
- 00:01.270
- 00:01.251
- 0.0
* - :ref:`sphx_glr_auto_examples_applications_plot_text.py` (``plot_text.py``)
- 00:00.797
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Expand Up @@ -318,7 +318,7 @@ degraded version of it.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 13.984 seconds)
**Total running time of the script:** (0 minutes 13.936 seconds)


.. _sphx_glr_download_auto_examples_color_exposure_plot_adapt_hist_eq_3d.py:
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Expand Up @@ -206,7 +206,7 @@ Finally, we can use this handler with ``adapt_rgb`` just as before:

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 1.596 seconds)
**Total running time of the script:** (0 minutes 1.595 seconds)


.. _sphx_glr_download_auto_examples_color_exposure_plot_adapt_rgb.py:
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Expand Up @@ -135,7 +135,7 @@ that fall within the 2nd and 98th percentiles [2]_.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 0.791 seconds)
**Total running time of the script:** (0 minutes 0.740 seconds)


.. _sphx_glr_download_auto_examples_color_exposure_plot_equalize.py:
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Expand Up @@ -122,7 +122,7 @@ image for each channel.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 1.226 seconds)
**Total running time of the script:** (0 minutes 1.138 seconds)


.. _sphx_glr_download_auto_examples_color_exposure_plot_histogram_matching.py:
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Expand Up @@ -142,7 +142,7 @@ Now we can easily manipulate the hematoxylin and DAB channels:

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 1.499 seconds)
**Total running time of the script:** (0 minutes 1.443 seconds)


.. _sphx_glr_download_auto_examples_color_exposure_plot_ihc_color_separation.py:
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Expand Up @@ -219,7 +219,7 @@ only a single slice is shown for visual inspection.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 3.174 seconds)
**Total running time of the script:** (0 minutes 2.933 seconds)


.. _sphx_glr_download_auto_examples_color_exposure_plot_local_equalize.py:
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Expand Up @@ -117,7 +117,7 @@ correction on the input image.
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 0.849 seconds)
**Total running time of the script:** (0 minutes 0.811 seconds)


.. _sphx_glr_download_auto_examples_color_exposure_plot_log_gamma.py:
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Expand Up @@ -188,7 +188,7 @@ unevenly illuminated.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 0.732 seconds)
**Total running time of the script:** (0 minutes 0.649 seconds)


.. _sphx_glr_download_auto_examples_color_exposure_plot_regional_maxima.py:
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Expand Up @@ -74,7 +74,7 @@ References
.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 0.664 seconds)
**Total running time of the script:** (0 minutes 0.662 seconds)


.. _sphx_glr_download_auto_examples_color_exposure_plot_rgb_to_gray.py:
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Expand Up @@ -166,7 +166,7 @@ remove the shadow of the cup:

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 1.375 seconds)
**Total running time of the script:** (0 minutes 1.230 seconds)


.. _sphx_glr_download_auto_examples_color_exposure_plot_rgb_to_hsv.py:
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Expand Up @@ -254,7 +254,7 @@ image.org/docs/0.9.x/api/skimage.color.html#label2rgb>`_.

.. rst-class:: sphx-glr-timing

**Total running time of the script:** (0 minutes 2.126 seconds)
**Total running time of the script:** (0 minutes 2.017 seconds)


.. _sphx_glr_download_auto_examples_color_exposure_plot_tinting_grayscale_images.py:
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