fix pertpy mentions

Signed-off-by: zethson <[email protected]>

docs/conf.py

@@ -109,7 +109,7 @@
 html_theme = "furo"
 
 # Set link name generated in the top bar.
-html_title = "pertpy"
+html_title = "sc-toolbox"
 html_logo = "_images/logo.png"
 
 html_theme_options = {
@@ -165,7 +165,7 @@
         <p class="admonition-title">Note</p>
         <p>
         This page was generated from
-        <a class="reference external" href="https://github.com/theislab/pertpy/tree/{version}/">{docname}</a>.
+        <a class="reference external" href="https://github.com/schillerlab/sc-toolbox/tree/{version}/">{docname}</a>.
         Some tutorial content may look better in light mode.
         </p>
     </div>

docs/contributing.md

@@ -21,14 +21,10 @@ Request features on the [Issue Tracker].
 
 ## Getting the code
 
-pertpy uses submodules for the tutorials. Hence, the project must be cloned as:
-
 ```console
-$ git clone --recurse-submodules --remote-submodules https://github.com/theislab/pertpy
+$ git clone --recurse-submodules https://github.com/schillerlab/sc-toolbox
 ```
 
-This will automatically also clone and update the submodules.
-
 ## How to set up your development environment
 
 You need Python 3.8+ and the following tools:
@@ -54,7 +50,7 @@ or the command-line interface:
 
 ```console
 $ poetry run python
-$ poetry run pertpy
+$ poetry run sc_toolbox
 ```
 
 ## How to test the project
@@ -121,12 +117,12 @@ It is recommended to open an issue before starting work on anything.
 This will allow a chance to talk it over with the owners and validate your approach.
 
 [apache2.0 license]: https://opensource.org/licenses/Apache2.0
-[code of conduct]: https://github.com/theislab/pertpy/CODE_OF_CONDUCT.md
-[documentation]: https://pertpy.readthedocs.io/
-[issue tracker]: https://github.com/theislab/pertpy/issues
+[code of conduct]: https://github.com/schillerlab/sc-toolbox/CODE_OF_CONDUCT.md
+[documentation]: https://sc-toolbox.readthedocs.io/
+[issue tracker]: https://github.com/schillerlab/sc-toolbox/issues
 [nox]: https://nox.thea.codes/
 [nox-poetry]: https://nox-poetry.readthedocs.io/
 [poetry]: https://python-poetry.org/
-[pull request]: https://github.com/theislab/pertpy/pulls
+[pull request]: https://github.com/schillerlab/sc-toolbox/pulls
 [pytest]: https://pytest.readthedocs.io/
-[source code]: https://github.com/theislab/pertpy
+[source code]: https://github.com/schillerlab/sc-toolbox

sc_toolbox/__init__.py

@@ -6,8 +6,8 @@
 
 from pypi_latest import PypiLatest
 
-pertpy_pypi_latest = PypiLatest("sc-toolbox", __version__)
-pertpy_pypi_latest.check_latest()
+sc_toolbox_pypi_latest = PypiLatest("sc-toolbox", __version__)
+sc_toolbox_pypi_latest.check_latest()
 
 from . import plot as pl
 from . import preprocessing as pp