Fixed processing of references in Baccin2019

saezlab · Nov 19, 2024 · f507bf9 · f507bf9
1 parent 940309e
commit f507bf9
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Showing 2 changed files with 7 additions and 1 deletion.
diff --git a/pypath/inputs/baccin2019.py b/pypath/inputs/baccin2019.py
@@ -154,7 +154,7 @@ def get_partners(components, sources, references):
             _ref for _ref in
             (
                 ref.strip().replace('.0', '')
-                for ref in rec[7].split(',')
+                for ref in str(rec[7]).split(',')
             )
             if _ref.isdigit()
         }

diff --git a/pypath/inputs/common.py b/pypath/inputs/common.py
@@ -81,11 +81,17 @@ def read_xls(
                 )
 
             try:
+
                 if isinstance(sheet, int):
+
                     sheet = book.sheet_by_index(sheet)
+
                 else:
+
                     sheet = book.sheet_by_name(sheet)
+
             except xlrd.biffh.XLRDError:
+
                 sheet = book.sheet_by_index(0)
 
             table = [