checking organisms in network: skipping complexes

saezlab · Jan 13, 2020 · 6046e20 · 6046e20
1 parent 2a5abb4
commit 6046e20
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Showing 2 changed files with 3 additions and 1 deletion.
diff --git a/src/pypath/__version__ b/src/pypath/__version__
@@ -1 +1 @@
-0.9.4
+0.9.5
diff --git a/src/pypath/network.py b/src/pypath/network.py
@@ -655,6 +655,7 @@ def load_resource(
         self._add_edge_list(only_directions = only_directions)
 
         self.organisms_check()
+        self.remove_zero_degree()
 
         self._log(
             'Completed: loading network data from '
@@ -1903,6 +1904,7 @@ def organisms_check(
             if (
                 (
                     remove_mismatches and
+                    not node.entity_type == 'complex' and
                     not reflists.check(
                         name = node.identifier,
                         id_type = node.id_type,