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add intrinsic net analysis to main_sim.ipynb #286

add intrinsic net analysis to main_sim.ipynb

add intrinsic net analysis to main_sim.ipynb #286

name: Unit test
on:
push:
branches: ['**']
pull_request:
branches: ['**']
env:
PYTHONPATH: C:\nrn_test\lib\python
NEURONHOME: C:\nrn_test
jobs:
build:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [windows-latest]
python-version: [3.7, 3.8]
steps:
- uses: actions/checkout@v2
- uses: conda-incubator/setup-miniconda@v2
with:
activate-environment: test
python-version: ${{ matrix.python-version }}
- name: Install Neuron on Windows separately
shell: cmd
run: |
powershell -command "gh release download --repo https://github.com/neuronsimulator/nrn --pattern '*.exe' --output nrn-setup.exe"
start /b /wait .\nrn-setup.exe /S /D=C:\nrn_test
powershell -command "'C:\nrn_test\bin' >> $env:GITHUB_PATH"
python -c "import neuron"
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
- name: Install dependencies and HNN
shell: cmd
run: |
python -m pip install --upgrade pip
pip install flake8 pytest pytest-cov
pip install psutil joblib
pip install --verbose .[gui]
- name: Test with pytest
shell: cmd
run: |
python -m pytest . --cov=hnn_core hnn_core/tests/ --cov-report=xml