May as well release to pypi...

ryneches · Apr 1, 2017 · 6fd8777 · 6fd8777
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diff --git a/README.md b/README.md
@@ -158,10 +158,15 @@ for generating them, is also included.
 #### Host/Parasite
 
 * **gopher-louse** Hafner, M.S. & Nadler, S.A. 1988. *Phylogenetic trees support the coevolution of parasites and their hosts.* Nature 332: 258-259)
-* **dove-louse** Dale H. Clayton, Sarah E. Bush, Brad M. Goates, and Kevin P. Johnson. 2003. *Host defense reinforces host–parasite cospeciation.* PNAS.
+* **dove-louse** Dale H. Clayton, Sarah E. Bush, Brad M. Goates, and Kevin P. Johnson. 2003. *Host defense reinforces host–parasite cospeciation.* PNAS. 
 
 #### Plant/Pollinator (visitor) interactions
 
+These were originally collected by Enrico Rezende *et al.* :
+
+> Enrico L. Rezende, Jessica E. Lavabre, Paulo R. Guimarães, Pedro Jordano & Jordi Bascompte 
+"[Non-random coextinctions in phylogenetically structured mutualistic networks](http://www.nature.com/nature/journal/v448/n7156/abs/nature05956.html)," *Nature*, 2007
+
 * **arr1**	Arroyo, M.T.K., R. Primack & J.J. Armesto. 1982. *Community studies in pollination ecology in the high temperate Andes of central Chile. I. Pollination mechanisms and altitudinal variation.* Amer. J. Bot. 69:82-97.
 * **arr2**	Arroyo, M.T.K., R. Primack & J.J. Armesto. 1982. *Community studies in pollination ecology in the high temperate Andes of central Chile. I. Pollination mechanisms and altitudinal variation.* Amer. J. Bot. 69:82-97.
 * **arr3**	Arroyo, M.T.K., R. Primack & J.J. Armesto. 1982. *Community studies in pollination ecology in the high temperate Andes of central Chile. I. Pollination mechanisms and altitudinal variation.* Amer. J. Bot. 69:82-97.

diff --git a/data/dove-louse/dove-louse.ipynb b/data/dove-louse/dove-louse.ipynb
@@ -1169,7 +1169,11 @@
     "    fasta = Entrez.efetch( db='nucleotide', id=ntid, rettype='fasta', retmode='text' ).read()\n",
     "    louse_dna = parse( StringIO( fasta ), 'fasta' ).next()\n",
     "    print louse_dna.description\n",
-    "    louse_records.append( louse_dna )"
+    "    louse_records.append( louse_dna )\n",
+    "\n",
+    "AF279704:AF279743\n",
+    "AF278608:AF278643\n",
+    "AY151003:AY151026"
    ]
   },
   {

diff --git a/data/sedge-smut/sedge-smut.ipynb b/data/sedge-smut/sedge-smut.ipynb
diff --git a/setup.cfg b/setup.cfg
@@ -0,0 +1,2 @@
+[metadata]
+description-file = README.md
diff --git a/setup.py b/setup.py
@@ -12,6 +12,7 @@
     author_email='[email protected]',
     license='BSD',
     packages=['SuchTree'],
+    download_url='https://github.com/ryneches/SuchTree/archive/0.1.tar.gz',
     install_requires=[
         'scipy>=0.18',
         'numpy',