version 2.0.0 with PyPI compatability, now that statsmodels 0.12.x is…

… released

.setup.cfg

@@ -0,0 +1,25 @@
+[metadata]
+# replace with your username:
+name = neuroHarmonize
+version = 2.0.0
+author = Raymond Pomponio
+author_email = [email protected]
+description = Harmonization tools for multi-center neuroimaging studies.
+long_description = file: README.rst
+long_description_content_type = text/markdown
+url = https://github.com/rpomponio/neuroHarmonize
+project_urls =
+    Bug Tracker = https://github.com/rpomponio/neuroHarmonize/issues
+classifiers =
+    Programming Language :: Python :: 3
+    License :: OSI Approved :: MIT License
+    Operating System :: OS Independent
+
+[options]
+package_dir =
+    = src
+packages = find:
+python_requires = >=3.6
+
+[options.packages.find]
+where = src

README.rst

@@ -29,7 +29,7 @@ features:
 Installation
 ------------
 
-Latest version: ``1.0.x`` (August 27, 2020)
+Latest version: ``2.0.0`` (May 2021)
 
 Requirements:
 
@@ -39,14 +39,17 @@ Requirements:
 *To make installation easier, neuroCombat is not a formal dependency for this
 package, but the source code is included to call neuroCombat functions.*
 
-**Option 1: Install from PyPI (not available yet)**
+**Option 1: Install from PyPI**
 
-*Instructions will be written once package is released on PyPI. The package
-cannot be released on PyPI until a developer version of statsmodels is released.*
+To install the latest version of ``neuroHarmonize``, run the following in the command line:
+
+    >>> pip install neuroHarmonize
 
 **Option 2: Install from GitHub**
 
-1. Install the developer version of ``statsmodels``. This package depends on ``statsmodels v0.12.0.dev0``. Until the dev version is released on PyPI, the current workaround is to run the following in the command line:
+*Use if the first option fails.*
+
+1. Install the developer version of ``statsmodels``. This package depends on ``statsmodels v0.12.x``. Run the following in the command line:
 
     >>> pip install git+https://github.com/statsmodels/statsmodels
 
@@ -57,8 +60,8 @@ cannot be released on PyPI until a developer version of statsmodels is released.
 Quick Start
 -----------
 
-*Please note that the ComBat [3]_ algorithm corrects for site effects but
-intentionally preserves covariate effects.* If you wish to remove covariate
+*Please note:* the ComBat [3]_ algorithm corrects for site effects but
+intentionally preserves covariate effects. If you wish to remove covariate
 effects as well you can use the argument ``return_s_data``.
 
 You must provide a **data matrix** which is a ``numpy.array`` containing the

pyproject.toml

@@ -0,0 +1,6 @@
+[build-system]
+requires = [
+    "setuptools>=42",
+    "wheel"
+]
+build-backend = "setuptools.build_meta"

setup.py

@@ -5,13 +5,13 @@ def readme():
         return f.read()
 
 setup(name='neuroHarmonize',
-      version='1.0.0',
+      version='2.0.0',
       description='Harmonization tools for multi-center neuroimaging studies.',
       long_description=readme(),
       url='https://github.com/rpomponio/neuroHarmonize',
       author='Raymond Pomponio',
       author_email='[email protected]',
       license='MIT',
       packages=['neuroHarmonize'],
-      install_requires=['numpy', 'pandas', 'nibabel', 'statsmodels>=0.11.0.dev0'],
+      install_requires=['numpy', 'pandas', 'nibabel', 'statsmodels>=0.12.0'],
       zip_safe=False)