Skip to content
View rmarkello's full-sized avatar

Organizations

@ME-ICA @netneurolab @physiopy

Block or report rmarkello

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
rmarkello/README.md

Hi there 👋

I am currently a data engineer at Komodo Health where I develop pipelines for processing and analyzing healthcare data at scale.

I was previously a data engineer at Octave where I created data infrastructure and tooling for ingestion, processing, and analysis of multimodal clinical data to support precision healthcare for patients with multiple sclerosis. I received my PhD at the Montreal Neurological Institute in the Network Neuroscience Lab, where my work focused on understanding how different choices made during the research process can have outsize impact on scientific outcomes.

In my spare time I’ve developed some software designed to make doing research easier, like abagen (a toolbox for working with data from the Allen Human Brain Atlas) and snfpy (a toolbox for performing similarity network fusion on multimodal data). Feel free to drop me a line on Twitter if you want to chat!

Pinned Loading

  1. abagen abagen Public

    A toolbox for working with Allen Human Brain Atlas microarray expression data

    Python 94 41

  2. snfpy snfpy Public

    Similarity network fusion in Python

    Python 77 20

  3. netneurolab/pypyls netneurolab/pypyls Public

    A Python implementation of Partial Least Squares (PLS) decomposition

    Python 61 29

  4. netneurolab/neuromaps netneurolab/neuromaps Public

    A toolbox for comparing brain maps

    Python 253 56