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Don't skip tests in R CMD check. #13

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merged 6 commits into from
Apr 19, 2024
Merged

Don't skip tests in R CMD check. #13

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5652b2b
Don't skip tests in R CMD check.
mlondschien Mar 27, 2024
8768729
Merge pull request #2 from ratschlab/merge-fork
manuelburger Apr 8, 2024
23e205b
Skip failing test.
mlondschien Apr 16, 2024
313f241
Merge branch 'enable-tests-ci' of github.com:ratschlab/ricu into enab…
manuelburger Apr 19, 2024
56e2373
Fix variable typo in partitioned loader
manuelburger Apr 19, 2024
605430e
Don't skip test
manuelburger Apr 19, 2024
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2 changes: 1 addition & 1 deletion R/setup-import.R
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Expand Up @@ -299,7 +299,7 @@ partition_table <- function(x, dir, progress = NULL, chunk_length = 10 ^ 7, temp
for (i in seq_along(file)) {
dat <- readr::read_csv(file[i], col_types = spec, progress = FALSE, ...)
report_problems(dat, rawf[i])
split_write(callback(data), pfun, tempdir, i, progress, name, tick)
split_write(callback(dat), pfun, tempdir, i, progress, name, tick)
}
}

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2 changes: 1 addition & 1 deletion tests/testthat/test-callback.R
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@@ -1,4 +1,4 @@
skip_on_cran()


test_that("aumc callbacks", {

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2 changes: 1 addition & 1 deletion tests/testthat/test-concept.R
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@@ -1,4 +1,4 @@
skip_on_cran()


test_that("load hirid items", {

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2 changes: 1 addition & 1 deletion tests/testthat/test-helpers.R
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@@ -1,4 +1,4 @@
skip_on_cran()


test_that("expect_all_identical", {

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2 changes: 1 addition & 1 deletion tests/testthat/test-scores.R
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@@ -1,4 +1,4 @@
skip_on_cran()


skip_if_srcs_missing(c("mimic_demo", "eicu_demo"))

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2 changes: 1 addition & 1 deletion tests/testthat/test-setup-attach.R
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@@ -1,4 +1,4 @@
skip_on_cran()


test_that("auto attach env var", {

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2 changes: 1 addition & 1 deletion tests/testthat/test-setup-import.R
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@@ -1,4 +1,4 @@
skip_on_cran()


tmp_cars <- withr::local_tempdir()

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2 changes: 1 addition & 1 deletion tests/testthat/test-tbl-base.R
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@@ -1,4 +1,4 @@
skip_on_cran()


test_that("icu_tbl subsetting", {

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2 changes: 1 addition & 1 deletion tests/testthat/test-tbl-class.R
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skip_on_cran()


test_that("id_tbl constructors", {

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2 changes: 1 addition & 1 deletion tests/testthat/test-tbl-utils.R
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@@ -1,4 +1,4 @@
skip_on_cran()


test_that("rename_cols for id_tbl", {

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2 changes: 1 addition & 1 deletion tests/testthat/test-utils-cli.R
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@@ -1,4 +1,4 @@
skip_on_cran()


test_that("cli progress", {

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2 changes: 1 addition & 1 deletion tests/testthat/test-utils-export.R
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skip_on_cran()


test_that("psv export", {

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2 changes: 1 addition & 1 deletion tests/testthat/test-utils-file.R
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skip_on_cran()


test_that("data dir", {

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2 changes: 1 addition & 1 deletion tests/testthat/test-utils-ts.R
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skip_on_cran()


test_that("collapse/expand", {

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