Merge branch 'master' of https://github.com/rajewsky-lab/novosparc

rajewsky-lab · Apr 20, 2021 · 4ad058b · 4ad058b
2 parents 4fac373 + 6f4c4c3
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diff --git a/docs/release_notes.rst b/docs/release_notes.rst
@@ -2,6 +2,11 @@
 .. role:: smaller
 .. role:: noteversion
 
+Version 0.4.2 :small:`03 April 2021`
+---------------------------------------
+Improved package structure, fixed minor performace issues, and fixed bugs. Added two new tutorials (corti & osteosarcoma) and 
+updated the previous tutorials with validation analyses.
+
 Version 0.4.1 :small:`24 August 2020`
 ---------------------------------------
 Changed the package structure and run flow of the scripts. Added anndata and scanpy support. Updated tutorials and implemented

diff --git a/docs/requirements.txt b/docs/requirements.txt
@@ -1,13 +1,15 @@
 cycler>=0.10.0
-cython
+Cython
 decorator>=4.3.2
 kiwisolver>=1.0.1
 matplotlib>=2.2
 networkx
 numpy
+POT
 pyparsing>=2.3.1
 python-dateutil>=2.8.0
-scikit-learn>=0.20.2
+scikit-learn>=0.22.1
 scipy
 six>=1.12.0
 scanpy
+altair
diff --git a/novosparc/__init__.py b/novosparc/__init__.py
@@ -1,14 +1,16 @@
 __author__ = ', '.join([
     'Nikos Karaiskos',
     'Mor Nitzan',
-    'Enes Senel'
+    'Enes Senel',
+    'Noa Moriel'
 ])
 __email__ = ', '.join([
     '[email protected]',
     '[email protected]',
-    '[email protected]'
+    '[email protected]',
+    '[email protected]'
 ])
-__version__ = '0.4.1'
+__version__ = '0.4.2'
 
 from . import plotting as pl
 from . import preprocessing as pp