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0 7 3 catch exceptions #151

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merged 2 commits into from
Oct 16, 2023
Merged

0 7 3 catch exceptions #151

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ed1348d
0.7.3
drernie Oct 16, 2023
cca68fa
catch exceptions
drernie Oct 16, 2023
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4 changes: 4 additions & 0 deletions CHANGELOG.md
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Original file line number Diff line number Diff line change
@@ -1,5 +1,9 @@
# Changelog

## [0.7.3] 2023-10-16a

- Catch and log exception on push failure

## [0.7.2] 2023-10-16

- Throw exceptions on push failure
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4 changes: 2 additions & 2 deletions README.md
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Expand Up @@ -75,8 +75,8 @@ From the command-line, do, e.g.:

```bash
# export NXF_VER=23.04.3
export NXF_PLUGINS_TEST_REPOSITORY=https://github.com/quiltdata/nf-quilt/releases/download/0.7.2/nf-quilt-0.7.2-meta.json
nextflow run main.nf -plugins [email protected].2
export NXF_PLUGINS_TEST_REPOSITORY=https://github.com/quiltdata/nf-quilt/releases/download/0.7.3/nf-quilt-0.7.3-meta.json
nextflow run main.nf -plugins [email protected].3
```

For Tower, you can use the "Pre-run script" to set the environment variables.
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7 changes: 6 additions & 1 deletion plugins/nf-quilt/src/main/nextflow/quilt/QuiltProduct.groovy
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Expand Up @@ -138,7 +138,12 @@ ${nextflow}
log.debug("setupReadme: $text")
List<Map> quilt_summarize = setupSummarize()
log.debug("setupSummarize: $quilt_summarize")
pkg.push(msg, meta)
try {
pkg.push(msg, meta)
}
catch (Exception e) {
log.error("publish failed: ${e.getMessage()}\n${e}", pkg.meta)
}
print("SUCCESS: $pkg\n")
}

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2 changes: 1 addition & 1 deletion plugins/nf-quilt/src/resources/META-INF/MANIFEST.MF
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@@ -1,7 +1,7 @@
Manifest-Version: 1.0
Plugin-Class: nextflow.quilt.QuiltPlugin
Plugin-Id: nf-quilt
Plugin-Version: 0.7.2
Plugin-Version: 0.7.3
Plugin-Provider: Quilt Data
Plugin-Requires: >=22.10.6

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