iterate over package folders/files

Correct package version
quiltdata · Aug 27, 2024 · 8e45518 · 8e45518
1 parent 70c4d94
commit 8e45518
Showing 1 changed file with 7 additions and 15 deletions.
diff --git a/plugins/nf-quilt/src/test/nextflow/quilt/nio/QuiltNioTest.groovy b/plugins/nf-quilt/src/test/nextflow/quilt/nio/QuiltNioTest.groovy
@@ -33,7 +33,8 @@ class QuiltNioTest extends QuiltSpecification {
 
     private static final String NULL_URL = 'quilt+s3://quilt-dev-null#package=test/null'
     //https://open.quiltdata.com/b/quilt-example/tree/examples/hurdat/
-    private static final String PACKAGE_URL = 'quilt+s3://quilt-example#package=examples/hurdat@f8d1478d93'
+    private static final String HASH = 'f8d1478d9326e1c98ded6e933c1aa19cf8913735bdcf0be6ccf0efd3b02218f4'
+    private static final String PACKAGE_URL = "quilt+s3://quilt-example#package=examples/hurdat@${HASH}"
     private static final String WRITE_URL = packagePath('folder/file-name.txt')
     private static final String READ_URL = packagePath('data/atlantic-storms.csv')
     private static final String TEXT = 'Hello world!'
@@ -237,32 +238,23 @@ class QuiltNioTest extends QuiltSpecification {
         pkg.relativeChildren('')
     }
 
-    /* FIXME: Test fails on Windows and Ubuntu. STDOUT shows:
-     Children: [README_NF_QUILT.md, alpha, bolder, create.txt, data, folder,
-                nf-quilt, notebooks, quilt_summarize.json, scripts, stream.txt]
-     Test has: [path=data, path=folder, path=notebooks,
-                path=quilt_summarize.json, path=scripts, path=stream.txt]
-    */
-    // @IgnoreIf({ System.getProperty('os.name').contains('indows') || System.getProperty('os.name').contains('ux') })
     void 'should iterate over package folders/files'() {
         given:
         Path path = Paths.get(new URI(PACKAGE_URL))
         when:
         QuiltPathIterator itr = new QuiltPathIterator(path, null)
-        println "ITR: ${itr}"
         then:
         itr != null
         itr.hasNext()
 
         when:
-        String[] ilist = itr*.toString()*.replaceFirst('quilt-example#package=examples%2fhurdat&', '').toArray()
-        println "ILIST: ${ilist}"
+        String[] ilist = itr*.toString()*.replaceFirst('quilt-example#package=examples%2fhurdat&path=', '').toArray()
         then:
         ilist.size() > 4
-        ilist.contains('path=README_NF_QUILT.md')
-        ilist.contains('path=data')
-        ilist.contains('path=folder')
-        ilist.contains('path=scripts')
+        ilist.contains('quilt_summarize.json')
+        ilist.contains('data')
+        ilist.contains('notebooks')
+        ilist.contains('scripts')
     }
 
     void 'should create a directory'() {