Correct blast #39
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Correct blast #39
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…an unique prefix name for results and recover them more easily
…to have an unique prefix name for results and recover them more easily" This reverts commit 1f01944.
cecilpert
commented
Dec 6, 2017
| cmd "blastp" ~env [ | ||
| opt "-db" dep db // db_name ; | ||
| opt "-query" dep query ; | ||
| opt "-out" ident (dest // results) ; |
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If I just try :
opt "-db" dep db ;
opt "-out" ident dest ;
I have an error message like : Command line argument error: Argument "out". File is not accessible: /bistro/dest. I think blastp needs a file name and not just a directory as output.
I have the same error if I remove mkdir-p dest
|
I forgot to add blast.mli, I'll write it later. |
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New PR for blast.ml, with modifications.