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name: Docker | ||
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on: | ||
push: | ||
paths: | ||
- 'docker/environment.yaml' | ||
- '.github/workflows/Docker.yml' | ||
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jobs: | ||
build-docker: | ||
strategy: | ||
fail-fast: false | ||
matrix: | ||
cfg: | ||
- runs-on: 'ubuntu-latest' | ||
platform: linux-64 | ||
python-version: '3.10' | ||
tags: 'psi4/psi4:latest,psi4/psi4:1.8.2,psi4/psi4:1.8' | ||
defaults: | ||
run: | ||
shell: bash -l {0} | ||
runs-on: ${{ matrix.cfg.runs-on }} | ||
name: "🐍 ${{ matrix.cfg.python-version }} • ${{ matrix.cfg.platform }}" | ||
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steps: | ||
- uses: actions/checkout@v3 | ||
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- name: Login to Docker Hub | ||
uses: docker/login-action@v2 | ||
with: | ||
username: ${{ secrets.DOCKERHUB_USERNAME }} | ||
password: ${{ secrets.DOCKERHUB_TOKEN }} | ||
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- name: Specialize Python | ||
run: | | ||
cd docker/ | ||
sed -i.bak 's/- python=3.8/- python=${{ matrix.cfg.python-version }}/g' environment.yaml | ||
- name: Set up Docker Buildx | ||
uses: docker/setup-buildx-action@v2 | ||
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- name: Build and push | ||
uses: docker/build-push-action@v4 | ||
with: | ||
context: ./docker | ||
#file: docker/Dockerfile | ||
build-args: | | ||
CondaFile=docker/environment.yaml | ||
#push: true | ||
push: false | ||
tags: ${{ matrix.cfg.tags }} | ||
#tags: psi4/psi4:latest,psi4/psi4:1.8.0,psi4/psi4:1.8 | ||
#tags: ${{ secrets.DOCKERHUB_USERNAME }}/psi4:latest | ||
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- name: Test | ||
run: | | ||
docker run ${{ secrets.DOCKERHUB_USERNAME }}/psi4:latest psi4 --version | ||
docker run ${{ secrets.DOCKERHUB_USERNAME }}/psi4:latest pytest -v /opt/conda/lib/python${{ matrix.cfg.python-version }}/site-packages/psi4/tests/ --color yes -n auto -m smoke | ||
- name: Set up Apptainer | ||
if: false | ||
uses: eWaterCycle/setup-apptainer@v2 | ||
with: | ||
apptainer-version: 1.1.2 | ||
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- name: Run an apptainer container | ||
if: false | ||
#run: apptainer run docker://alpine cat /etc/os-release | ||
run: apptainer build psi4-1.8.sif docker-daemon:${{ secrets.DOCKERHUB_USERNAME }}/psi4:latest | ||
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- name: Test Apptainer | ||
if: false | ||
run: | | ||
apptainer run psi4-1.8.sif psi4 --version | ||
apptainer run psi4-1.8.sif pytest -v /opt/conda/lib/python3.10/site-packages/psi4/tests/ --color yes -n auto -m smoke | ||
- name: Archive Apptainer Image | ||
if: false | ||
#if: ${{ github.repository == 'psi4/psi4' }} | ||
uses: actions/upload-artifact@v2 | ||
with: | ||
name: apptainer_sif | ||
path: | | ||
psi4-1.8.sif | ||
retention-days: 1 | ||
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- name: Push to Sylabs | ||
if: false | ||
run: apptainer push psi4-1.8.sif library://psi4/psi4/psi4-1.8:latest | ||
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#$ singularity push my-container.sif library://your-name/project-dir/my-container:latest | ||
#singularity push my-container.sif library://your-name/project-dir/my-container:latest | ||
#singularity push -U image.sif library://your-username/project-dir/my-container:tags | ||
#apptainer push /home/user/my.sif library://user/collection/my.sif:latest | ||
# #!/bin/bash | ||
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# set -eu | ||
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# CONDA_FILE="${1}" | ||
# FILE_BASE="${1//.yaml/}" | ||
# PROGRAM="${FILE_BASE//_*/}" | ||
# VERSION="${FILE_BASE//*_/}" | ||
# MANIFEST="${FILE_BASE}.manifest" | ||
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# DOCKER_TAG="${PROGRAM}:${VERSION}" | ||
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# if [[ ! -f "${CONDA_FILE}" ]] | ||
# then | ||
# echo "File ${CONDA_FILE} does not exist or is not a file" | ||
# exit 1 | ||
# fi | ||
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# echo "--------------------------------------------------------" | ||
# echo "Conda file: ${CONDA_FILE}" | ||
# echo "Program: ${PROGRAM}" | ||
# echo "Version: ${VERSION}" | ||
# echo "--------------------------------------------------------" | ||
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# docker build . --build-arg CondaFile="${CONDA_FILE}" -t "${DOCKER_TAG}" | ||
# docker run ${DOCKER_TAG} micromamba list --json > "${MANIFEST}" | ||
# apptainer build ${FILE_BASE}.sif docker-daemon:${DOCKER_TAG} |