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Update README.md
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ofrei committed May 23, 2019
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Expand Up @@ -46,6 +46,8 @@ When use MiXeR on a cluster, we recommend to assign the whole node to each MiXeR

### Install on Linux using pre-built binaries

This step typically takes about 10 minutes to complete.

* Download "Linux_x64.tar.gz" file from the latest MiXeR release (https://github.com/precimed/mixer/releases)
* Extract "Linux_x64.tar.gz" to a new folder. Below we refer to this folder as ``MIXER_ROOT``.
* Test that MiXeR executable runs smoothly:
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```
Repeat the above analysis for the second trait (``PGC_SCZ_2014_EUR_qc_noMHC.csv.gz``).
These steps typically take about 8 hours to complete.
### Bivariate (cross-trait) analysis
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out_file='PGC_SCZ_2014_EUR_qc_noMHC_vs_SSGAC_EDU_2018_no23andMe_noMHC.test';
```
These steps typically take about 10 hours to complete.
### Sequence of operations
MiXeR performs the following sequence of operations. Some stems might be skipped, depending on user-provided options.
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