[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

capsul/database/sqlite.py

@@ -485,9 +485,9 @@ def job_finished_json(
                         sql, [engine_id, execution_id, waiting_id]
                     ).fetchone()
                     waiting_job = json.loads(row[0])
-                    waiting_job[
-                        "return_code"
-                    ] = "Not started because de dependent job failed"
+                    waiting_job["return_code"] = (
+                        "Not started because de dependent job failed"
+                    )
                     sql = "UPDATE capsul_job SET job=? WHERE engine_id=? AND execution_id=? AND job_id=?"
                     sqlite.execute(
                         sql, [json.dumps(waiting_job), engine_id, execution_id, job_id]

capsul/execution_context.py

@@ -350,9 +350,9 @@ def _create_jobs(
                         field.metadata("write", False)
                         and field.name in parameters.content
                     ):
-                        nodes_dict.setdefault(dest_node.name, {})[
-                            plug_name
-                        ] = parameters.content[field.name]
+                        nodes_dict.setdefault(dest_node.name, {})[plug_name] = (
+                            parameters.content[field.name]
+                        )
                         # if debug: print('-> add write in nodes_dict')
                     else:
                         parameters.content[field.name] = nodes_dict.get(
@@ -563,9 +563,9 @@ def _create_jobs(
                                     else:
                                         suffix = ""
                                     uuid = str(uuid4())
-                                    value[
-                                        i
-                                    ] = f"{prefix}.{field.name}_{i}_{uuid}{suffix}"
+                                    value[i] = (
+                                        f"{prefix}.{field.name}_{i}_{uuid}{suffix}"
+                                    )
                     # print('generate tmp:', value)
                 if value is undefined:
                     value = process.getattr(field.name, None)

capsul/pipeline/__init__.py

@@ -1,2 +1 @@
-""" Pipelining elements for CAPSUL
-"""
+"""Pipelining elements for CAPSUL"""

capsul/pipeline/custom_nodes/__init__.py

@@ -1,2 +1 @@
-""" This module is a placeholder for custom nodes types. Custom nodes can be used as pipeline nodes, do not represent a process (a physical job in a computing resource), but can help setting things up in a pipeline structure or parameters.
-"""
+"""This module is a placeholder for custom nodes types. Custom nodes can be used as pipeline nodes, do not represent a process (a physical job in a computing resource), but can help setting things up in a pipeline structure or parameters."""

capsul/pipeline/custom_nodes/loo_node.py

@@ -3,7 +3,6 @@
 ------------------------
 """
 
-
 from soma.controller import Any, Controller, type_from_str
 
 from capsul.process.node import Node

capsul/pipeline/custom_nodes/map_node.py

@@ -3,7 +3,6 @@
 ------------------------
 """
 
-
 from soma.controller import Controller, File, field, type_from_str, undefined
 
 from capsul.process.node import Node, Plug

capsul/pipeline/pipeline.py

@@ -1,4 +1,4 @@
-""" Pipeline main class module
+"""Pipeline main class module
 
 Classes
 =======

capsul/pipeline/test/test_optional_output_switch.py

@@ -23,7 +23,6 @@ def execute(self, context=None):
 
 
 class MyPipelineWithOptOut(Pipeline):
-
     """Simple Pipeline to test the OptionalOutputSwitch Node"""
 
     def pipeline_definition(self):

capsul/process/__init__.py

@@ -1,2 +1 @@
-""" capsul.process module
-"""
+"""capsul.process module"""

capsul/process/process.py

@@ -1,4 +1,4 @@
-""" Process main class and infrastructure
+"""Process main class and infrastructure
 
 Classes
 -------

capsul/qt_apps/utils/fill_treectrl.py

@@ -9,7 +9,6 @@
 ----------------------
 """
 
-
 # Soma import
 from soma.qt_gui.qt_backend import QtGui
 

capsul/test/test_fake_morphologist.py

@@ -166,9 +166,9 @@ def setUp(self):
                 "version": version,
                 "standalone": True,
             }
-            config["builtin"].setdefault("spm", {})[
-                f"spm_{version}_standalone"
-            ] = fakespm_config
+            config["builtin"].setdefault("spm", {})[f"spm_{version}_standalone"] = (
+                fakespm_config
+            )
 
         matlab_config = {
             "mcr_directory": str(tmp / "software" / "matlab"),

capsul/test/test_tiny_morphologist.py

@@ -365,9 +365,9 @@ def setUp(self):
                 "directory": str(fakespm),
                 "version": version,
             }
-            config["builtin"].setdefault("fakespm", {})[
-                f"fakespm_{version}"
-            ] = fakespm_config
+            config["builtin"].setdefault("fakespm", {})[f"fakespm_{version}"] = (
+                fakespm_config
+            )
 
         # Create a configuration file
         self.config_file = tmp / "capsul_config.json"