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* v0.1.1 updates

* Automatic renv profile update.

* Automatic renv profile update.

---------

Co-authored-by: rammprasad <[email protected]>
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rammprasad and rammprasad authored Nov 12, 2024
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Package: sdtm.oak
Type: Package
Title: SDTM Data Transformation Engine
Version: 0.1.0
Version: 0.1.1
Authors@R: c(
person("Rammprasad", "Ganapathy", email = "[email protected]",
role = c("aut", "cre")),
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6 changes: 5 additions & 1 deletion NEWS.md
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# sdtm.oak V0.1.1

Fixed the bug that was causing test cases to fail. Updated derive_blfl function to account for baseline_timepoints. Typo updates in the documention.

# sdtm.oak V0.1.0

The V0.1.0 release of {sdtm.oak} users can create the majority of the SDTM domains. Domains that are *NOT* in scope for the V0.1.0 release are DM, Trial Design Domains, SV, SE, RELREC, Associated Person domains, and EPOCH Variable across all domains.
Expand All @@ -20,7 +24,7 @@ The V0.1.0 release of {sdtm.oak} users can create the majority of the SDTM domai
- Functions to create conditioned dataframes to support if then else conditions in SDTM mappings
- Articles
- Algorithms
- Creating an Events SDTM domain
- Creating an interventions SDTM domain
- Creating a Findings SDTM domain
- Conditioned Data Frames
- Converting dates, times or date-times to ISO 8601
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2 changes: 1 addition & 1 deletion README.Rmd
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Expand Up @@ -67,7 +67,7 @@ We are planning to develop the below features in the subsequent releases.\
## References and Documentation

* Please go to [Algorithms](https://pharmaverse.github.io/sdtm.oak/articles/algorithms.html) article to learn about Algorithms.
* Please go to [Create Events Domain](https://pharmaverse.github.io/sdtm.oak/articles/events_domain.html) to learn about step by step process to create an Events domain.
* Please go to [Create Interventions Domain](https://pharmaverse.github.io/sdtm.oak/articles/interventions_domain.html) to learn about step by step process to create an Events domain.
* Please go to [Create Findings Domain](https://pharmaverse.github.io/sdtm.oak/articles/findings_domain.html) to learn about step by step process to create an Events domain.
* Please go to [Path to Automation](https://pharmaverse.github.io/sdtm.oak/articles/study_sdtm_spec.html)
to learn about how the foundational release sets up the stage for automation.
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -88,7 +88,7 @@ specification.
[Algorithms](https://pharmaverse.github.io/sdtm.oak/articles/algorithms.html)
article to learn about Algorithms.
- Please go to [Create Events
Domain](https://pharmaverse.github.io/sdtm.oak/articles/events_domain.html)
Domain](https://pharmaverse.github.io/sdtm.oak/articles/interventions_domain.html)
to learn about step by step process to create an Events domain.
- Please go to [Create Findings
Domain](https://pharmaverse.github.io/sdtm.oak/articles/findings_domain.html)
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4 changes: 2 additions & 2 deletions renv.lock
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},
"R.oo": {
"Package": "R.oo",
"Version": "1.26.0",
"Version": "1.27.0",
"Source": "Repository",
"Repository": "CRAN",
"Requirements": [
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"methods",
"utils"
],
"Hash": "4fed809e53ddb5407b3da3d0f572e591"
"Hash": "6ac79ff194202248cf946fe3a5d6d498"
},
"R.utils": {
"Package": "R.utils",
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4 changes: 2 additions & 2 deletions renv/profiles/4.2/renv.lock
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},
"R.oo": {
"Package": "R.oo",
"Version": "1.26.0",
"Version": "1.27.0",
"Source": "Repository",
"Repository": "CRAN",
"Requirements": [
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"methods",
"utils"
],
"Hash": "4fed809e53ddb5407b3da3d0f572e591"
"Hash": "6ac79ff194202248cf946fe3a5d6d498"
},
"R.utils": {
"Package": "R.utils",
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4 changes: 2 additions & 2 deletions renv/profiles/4.3/renv.lock
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},
"R.oo": {
"Package": "R.oo",
"Version": "1.26.0",
"Version": "1.27.0",
"Source": "Repository",
"Repository": "CRAN",
"Requirements": [
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"methods",
"utils"
],
"Hash": "4fed809e53ddb5407b3da3d0f572e591"
"Hash": "6ac79ff194202248cf946fe3a5d6d498"
},
"R.utils": {
"Package": "R.utils",
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2 changes: 1 addition & 1 deletion vignettes/findings_domain.Rmd
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Expand Up @@ -24,7 +24,7 @@ library(dplyr, warn.conflicts = FALSE)

This article describes how to create a Findings SDTM domain using the {sdtm.oak} package. Examples are currently presented and tested in the context of the VS domain.

Before reading this article, it is recommended that users review the "Creating an Events Domain" article, which provides a detailed explanation of various concepts in {sdtm.oak}, such as `oak_id_vars`, `condition_add`, etc. It also offers guidance on which mapping algorithms or functions to use for different mappings and provides a more detailed explanation of how these mapping algorithms or functions work.
Before reading this article, it is recommended that users review the "Creating an Interventions Domain" article, which provides a detailed explanation of various concepts in {sdtm.oak}, such as `oak_id_vars`, `condition_add`, etc. It also offers guidance on which mapping algorithms or functions to use for different mappings and provides a more detailed explanation of how these mapping algorithms or functions work.

In this article, we will dive directly into programming and provide further explanation only where it is required.

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---
title: "Creating an Events SDTM domain"
title: "Creating an Interventions SDTM domain"
output:
rmarkdown::html_vignette
vignette: >
%\VignetteIndexEntry{Creating an Events SDTM domain}
%\VignetteIndexEntry{Creating an Interventions SDTM domain}
%\VignetteEncoding{UTF-8}
%\VignetteEngine{knitr::rmarkdown}
---
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# Introduction

This article describes creating an Events SDTM domain using the `sdtm.oak` package. Examples are currently presented and tested in the context of the CM domain.
This article describes creating an Interventions SDTM domain using the `sdtm.oak` package. Examples are currently presented and tested in the context of the CM domain.

# Raw data

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