Use centralized CRAN status check action #489
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| on: | |
| workflow_dispatch: | |
| workflow_call: | |
| inputs: | |
| error-on: | |
| description: Input for the 'error_on' parameter in rcmdcheck::rcmdcheck() | |
| required: false | |
| default: note | |
| type: string | |
| push: | |
| branches: | |
| - main | |
| - devel | |
| pull_request: | |
| branches: | |
| - main | |
| - devel | |
| name: R CMD Check | |
| concurrency: | |
| group: r-cmd-check-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: "ghcr.io/pharmaverse/admiralci-${{ matrix.config.r }}:latest" | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| if: > | |
| !contains(github.event.commits[0].message, '[skip r-cmd-check]') | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {r: '4.1', repos: 'https://packagemanager.posit.co/cran/2021-05-03/'} | |
| - {r: '4.2', repos: 'https://packagemanager.posit.co/cran/2022-01-03/'} | |
| - {r: '4.3', repos: 'https://packagemanager.posit.co/cran/__linux__/focal/latest'} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: true | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| R_REPOS: ${{ matrix.config.repos }} | |
| steps: | |
| ##################### BEGIN boilerplate steps ##################### | |
| - name: Get branch names | |
| id: branch-name | |
| uses: tj-actions/[email protected] | |
| - name: Checkout repo (PR) 🛎 | |
| uses: actions/checkout@v3 | |
| if: github.event_name == 'pull_request' | |
| with: | |
| ref: ${{ steps.branch-name.outputs.head_ref_branch }} | |
| repository: ${{ github.event.pull_request.head.repo.full_name }} | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| if: github.event_name != 'pull_request' | |
| with: | |
| ref: ${{ steps.branch-name.outputs.head_ref_branch }} | |
| - name: Restore cache | |
| uses: actions/cache@v3 | |
| with: | |
| path: | | |
| ~/.staged.dependencies | |
| key: staged-deps | |
| - name: Run Staged dependencies | |
| uses: insightsengineering/staged-dependencies-action@v1 | |
| with: | |
| run-system-dependencies: false | |
| renv-restore: false | |
| enable-check: false | |
| cran-repos: "CRAN=${{ matrix.config.repos }}" | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| #####################c##################### | |
| - name: Check | |
| env: | |
| _R_CHECK_CRAN_INCOMING_REMOTE_: false | |
| _R_CHECK_FORCE_SUGGESTS_: false | |
| run: | | |
| if (!requireNamespace("rcmdcheck", quietly = TRUE)) install.packages("rcmdcheck") | |
| options(crayon.enabled = TRUE) | |
| check_error_on <- "${{ inputs.error-on }}" | |
| if (check_error_on == "") { | |
| check_error_on <- "note" | |
| } | |
| rcmdcheck::rcmdcheck( | |
| args = c("--no-manual", "--as-cran"), | |
| error_on = check_error_on, | |
| check_dir = "check" | |
| ) | |
| shell: Rscript {0} | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@main | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check |