Repositories list

• ETL-MissionControl-dbgap-submodule

  Public
  ETL-MissionControl-dbgap-submodule

  Shell

  •

  Apache License 2.0

  •0•0•0•0•Updated Dec 13, 2024Dec 13, 2024

• service-workbench-on-aws

  Public
  A platform that provides researchers with one-click access to collaborative workspace environments operating across teams, universities, and datasets while enabling university IT stakeholders to manage, monitor, and control spending, apply security best practices, and comply with corporate governance.

  JavaScript

  •

  Apache License 2.0

  •118•7•0•2•Updated Dec 13, 2024Dec 13, 2024

• picsure-dictionary

  Public
  Java

  •

  Apache License 2.0

  •1•0•0•0•Updated Dec 13, 2024Dec 13, 2024

• DBMI-LZA-Dev

  Public
  Deploy a multi-account cloud foundation to support highly-regulated workloads and complex compliance requirements.

  TypeScript

  •

  Apache License 2.0

  •460•0•0•0•Updated Dec 13, 2024Dec 13, 2024

• pic-sure-auth-microapp

  Public
  Java

  •

  Apache License 2.0

  •5•4•0•0•Updated Dec 13, 2024Dec 13, 2024

• Access-to-Data-using-PIC-SURE-API

  Public
  Jupyter Notebook

  •

  Apache License 2.0

  •8•6•0•0•Updated Dec 13, 2024Dec 13, 2024

• pic-sure-all-in-one

  Public
  Shell

  •

  Apache License 2.0

  •12•4•0•2•Updated Dec 13, 2024Dec 13, 2024

• pic-sure-baseline-release-control

  Public
  5•0•0•0•Updated Dec 13, 2024Dec 13, 2024

• i2b2v2-webclient

  Public
  JavaScript

  •4•2•1•0•Updated Dec 12, 2024Dec 12, 2024

• biodata_catalyst_stigmatizing_variables

  Public
  Jupyter Notebook

  •

  Apache License 2.0

  •0•1•0•2•Updated Dec 12, 2024Dec 12, 2024

• picsure-dictionary-etl

  Public
  Java

  •

  Apache License 2.0

  •0•0•0•2•Updated Dec 12, 2024Dec 12, 2024

• cellpop

  Public
  TypeScript

  •

  MIT License

  •1•0•11•2•Updated Dec 12, 2024Dec 12, 2024

• ETLToolSuite-EntityGenerator

  Public
  This tool will generate Entity Files that can be used to load into Datasources.

  Java

  •

  Apache License 2.0

  •1•0•0•0•Updated Dec 12, 2024Dec 12, 2024

• pic-sure-bdc-release-control

  Public
  Apache License 2.0

  •8•1•0•0•Updated Dec 12, 2024Dec 12, 2024

• chromoscope

  Public
  Interactive multiscale visualization for structural variation in human genomes

  TypeScript

  •

  MIT License

  •7•66•32•2•Updated Dec 12, 2024Dec 12, 2024

• pic-sure-metadata-curation

  Public
  Parse and generate variable-level data to be exposed through the search interface.

  SAS

  •

  Apache License 2.0

  •2•2•0•0•Updated Dec 12, 2024Dec 12, 2024

• PIC-SURE-Frontend

  Public
  A frontend for the PIC-SURE API

  TypeScript

  •

  Apache License 2.0

  •0•1•0•8•Updated Dec 11, 2024Dec 11, 2024

• pic-sure-public-datasets

  Public
  Public datasets available for PIC-SURE

  Apache License 2.0

  •0•0•0•0•Updated Dec 10, 2024Dec 10, 2024

• gehlenborglab-website

  Public
  Code for Gehlenborg Lab website.

  websitegehlenborglabhidivelab

  HTML

  •

  MIT License

  •38•8•21•21•Updated Dec 9, 2024Dec 9, 2024

• pic-sure-hpds

  Public
  Java

  •

  Apache License 2.0

  •6•3•0•7•Updated Dec 9, 2024Dec 9, 2024

• viv

  Public
  Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

  imagingome-tiffopenmicroscopy+ 4gehlenborglabzarrhubmapviv

  JavaScript

  •

  MIT License

  •46•290•44•4•Updated Dec 9, 2024Dec 9, 2024

• hypatio-app

  Public
  Python

  •0•4•0•8•Updated Dec 9, 2024Dec 9, 2024

• dbmi-fileservice

  Public
  Python

  •0•2•0•5•Updated Dec 9, 2024Dec 9, 2024

• fhirquestionnaire

  Public
  HTML

  •0•2•0•5•Updated Dec 9, 2024Dec 9, 2024

• dbmisvc-starter

  Public
  Python

  •0•1•0•4•Updated Dec 9, 2024Dec 9, 2024

• actions

  Public
  0•0•0•36•Updated Dec 9, 2024Dec 9, 2024

• Access-to-Data-and-Compute-using-Service-Workbench

  Public
  Repository for Service Workbench example notebooks

  Jupyter Notebook

  •

  Apache License 2.0

  •2•0•0•0•Updated Dec 4, 2024Dec 4, 2024

• generate-tiff-offsets

  Public
  Generate tiff offsets for optimized remote viewing

  HTML

  •

  MIT License

  •4•1•2•0•Updated Dec 4, 2024Dec 4, 2024

• jwt-creator

  Public
  A simple utility to create JWT tokens for development purposes. Feel free to extend if you need more claims or something.

  Java

  •

  MIT License

  •1•0•0•0•Updated Dec 4, 2024Dec 4, 2024

• pic-sure-r-adapter-hpds

  Public
  Adapter library for PIC-SURE HPDS Resources (in R language)

  R

  •

  Apache License 2.0

  •2•2•0•0•Updated Dec 4, 2024Dec 4, 2024