Repositories list

• Modeling-Environment-Setup

  Public
  A repo with instructions on how to setup a environment with *most* of the packages needed for modeling

  0•0•0•0•Updated Dec 20, 2024Dec 20, 2024

• bmtool

  Public
  A collection of scripts to assist with developing networks in BMTK (https://github.com/AllenInstitute/bmtk)

  pythondata-scienceneuroscience+ 3matplotlibneuronbmtk

  Python

  •

  MIT License

  •5•4•0•0•Updated Dec 18, 2024Dec 18, 2024

• Basics-of-Neurons-and-Networks

  Public
  A Collection of Jupyter notebooks in the area of Computational Neuroscience used in the Mizzou 4590 and 4001

  Jupyter Notebook

  •0•0•0•0•Updated Dec 11, 2024Dec 11, 2024

• Fear-Lesson-Plans

  Public
  A collection of notebooks discussing how we learn to fear things

  Jupyter Notebook

  •2•0•0•1•Updated Nov 26, 2024Nov 26, 2024

• cyneuro-resources

  Public
  HTML

  •0•0•0•0•Updated Nov 20, 2024Nov 20, 2024

• ML_camp

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Nov 9, 2024Nov 9, 2024

• .github

  Public
  0•0•0•0•Updated Nov 4, 2024Nov 4, 2024

• NMM-mod-files

  Public
  Mod files for the neural-modeling-manual that colab can compile with main NMM staying private

  AMPL

  •0•0•0•0•Updated Apr 23, 2024Apr 23, 2024

• Neural-Networks-Machine-Learning

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Feb 13, 2024Feb 13, 2024

• neuron-mechanisms-library

  Public
  A library of current channels for use in Neuron-based models

  computational-neuroscienceneuronneuron-simulator

  AMPL

  •0•0•0•0•Updated Jan 30, 2024Jan 30, 2024

• neuroapi

  Public
  Run NEURON simulations from a webpage using this API.

  pythonapineuron

  C

  •0•0•0•1•Updated May 1, 2023May 1, 2023

• 8001

  Public
  A repo for the 2023 spring 8001 class to store notebooks and code.

  0•0•0•0•Updated Jan 19, 2023Jan 19, 2023

• Amygdala

  Public
  Modeling Basal Forebrain of the Amygdala

  AMPL

  •3•0•0•0•Updated Jan 13, 2023Jan 13, 2023

• FearCircuitModules

  Public
  Fear Circuit Models for Medical Curriculum

  AMPL

  •0•0•0•0•Updated Dec 3, 2022Dec 3, 2022

• Borgers-Examples-in-BMTK

  Public
  BMTK examples based on the Borgers book.

  Jupyter Notebook

  •5•0•0•0•Updated Oct 31, 2022Oct 31, 2022

• theta

  Public
  A demo hippocampal network displaying the theta rhythm.

  C

  •

  MIT License

  •1•0•0•0•Updated Sep 29, 2020Sep 29, 2020

• cyneuro.github.io

  Public
  HTML

  •0•0•0•3•Updated May 29, 2020May 29, 2020

• UResearch

  Public
  Assignments for Undergrad Researchers

  AMPL

  •0•0•0•0•Updated Mar 4, 2020Mar 4, 2020