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    • R
      MIT License
      1010Updated Dec 5, 2024Dec 5, 2024
    • mtSwirl

      Public
      Python
      7000Updated Dec 4, 2024Dec 4, 2024
    • This is the website for the RCP at WEHI
      HTML
      GNU General Public License v3.0
      2210Updated Nov 27, 2024Nov 27, 2024
    • Dash GUI for editing Posix file acess control lists (ACLs)
      Python
      GNU General Public License v3.0
      0030Updated Nov 13, 2024Nov 13, 2024
    • Hail helper functions for the gnomAD project and Translational Genomics Group
      Python
      MIT License
      29000Updated Oct 29, 2024Oct 29, 2024
    • A fork of Broad's Gnomad Mitochondria package for local HPC usage.
      Python
      MIT License
      4000Updated Oct 29, 2024Oct 29, 2024
    • Nextflow
      Apache License 2.0
      0200Updated Oct 9, 2024Oct 9, 2024
    • [CVPR 2023] DynamicDet: A Unified Dynamic Architecture for Object Detection
      Python
      15000Updated Sep 26, 2024Sep 26, 2024
    • rag

      Public
      RAG toy example to build on. Copied from https://github.com/pixegami/rag-tutorial-v2
      HTML
      1081Updated Sep 11, 2024Sep 11, 2024
    • Improved command line interface and Python API for interacting with FileSender servers
      Python
      BSD 3-Clause "New" or "Revised" License
      1550Updated Sep 6, 2024Sep 6, 2024
    • Official Nextflow configuration file for WEHI
      Nextflow
      MIT License
      0000Updated Sep 5, 2024Sep 5, 2024
    • Code for running RFdiffusion
      Python
      Other
      355000Updated Aug 29, 2024Aug 29, 2024
    • Python
      Other
      118000Updated Aug 28, 2024Aug 28, 2024
    • Run cBioPortal using Docker Compose
      Shell
      34000Updated Aug 27, 2024Aug 27, 2024
    • Repository for Benchmarking Framework
      Jupyter Notebook
      GNU General Public License v3.0
      0070Updated Aug 12, 2024Aug 12, 2024
    • Vue
      GNU General Public License v3.0
      1110Updated Jul 14, 2024Jul 14, 2024
    • nf-template

      Public template
      A nextflow template repository
      Nextflow
      MIT License
      0000Updated Jul 12, 2024Jul 12, 2024
    • Visualisation of WEHI's pubmed landscape data using github.com/nomic-ai/deepscater
      TypeScript
      Other
      62000Updated Jul 11, 2024Jul 11, 2024
    • tarprof

      Public
      Utilities for profiling Targets workflows
      R
      GNU General Public License v3.0
      0110Updated May 29, 2024May 29, 2024
    • A user friendly R front-end for the Environment Modules system. Offers a way to load and unload system packages on shared HPC (High Performance Computing) environments, through R.
      R
      GNU General Public License v3.0
      0260Updated May 27, 2024May 27, 2024
    • Open source code for AlphaFold.
      Python
      Apache License 2.0
      2.3k000Updated May 20, 2024May 20, 2024
    • Templates for AWS Service Workbench from Relevance Lab
      Shell
      13000Updated Apr 19, 2024Apr 19, 2024
    • Container recipes created by the RCP team
      Roff
      MIT License
      0000Updated Mar 7, 2024Mar 7, 2024
    • Benchmarking different ways to calculate residuals in R using a number of different packages.
      0000Updated Dec 12, 2023Dec 12, 2023
    • Making the HPC democratisable for Imaging researchers
      Shell
      1000Updated Oct 23, 2023Oct 23, 2023
    • cbioportal-vcf2maf-pipeline A pipeline, adapted from Genome Nexus annotation tools pipeline, to convert VCF files with somatic mutations into a single MAF for import into cBioPortal.
      Shell
      0000Updated Oct 9, 2023Oct 9, 2023
    • Public data from stack overflow developer survey (2023) and iPython notebook to subset the data for healthcare academia.
      Jupyter Notebook
      0000Updated Sep 28, 2023Sep 28, 2023
    • Inference code for LLaMA models
      Python
      Other
      9.6k000Updated Sep 21, 2023Sep 21, 2023
    • Examples and recipes for Llama 2 model
      Python
      Other
      2.2k000Updated Sep 12, 2023Sep 12, 2023
    • Tools developed for AACR GENIE to allow annotation of vcf and maf files from a number of centers and merging the results
      Python
      MIT License
      15000Updated Sep 11, 2023Sep 11, 2023