Repositories list

• validator

  Public
  The BioPAX Validator

  Java

  •

  MIT License

  •2•3•3•1•Updated Oct 4, 2024Oct 4, 2024

• Paxtools

  Public
  The BioPAX Object Model, API and utilities implemented in Java

  Java

  •

  MIT License

  •12•26•7•0•Updated Jul 4, 2024Jul 4, 2024

• BioPAX.github.io

  Public
  BioPAX site

  CSS

  •1•3•0•0•Updated Jun 26, 2024Jun 26, 2024

• specification

  Public
  BioPAX specification and examples

  4•2•3•0•Updated Jun 17, 2024Jun 17, 2024

• paxtoolsr

  Public
  The package provides a set of R functions for interacting with BioPAX OWL files using Paxtools and the querying Pathway Commons (PC) molecular interaction database

  R

  •1•10•6•0•Updated Jan 10, 2023Jan 10, 2023

• paxtoolsTutorial

  Public
  TeX

  •1•2•1•0•Updated Feb 24, 2017Feb 24, 2017

• biopax

  Public
  Core App: BioPAX support

  Java

  •

  GNU Lesser General Public License v2.1

  •3•1•0•0•Updated Jan 14, 2016Jan 14, 2016

• biopaxWebConsole

  Public
  Online console for trying out BioPAX Paxtools Java API

  JavaScript

  •43•0•0•0•Updated Oct 29, 2015Oct 29, 2015

• pattern

  Public archive
  Deprecated (- moving inside the Paxtools)

  0•1•0•0•Updated Aug 20, 2015Aug 20, 2015