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add clean up to ci

add clean up to ci #2

Workflow file for this run

on:
push:
branches: [main]
pull_request:
name: Render porject
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
build-deploy:
runs-on: ubuntu-latest
env:
BRANCH_NAME: ${{ github.head_ref || github.ref_name }}
steps:
- uses: actions/checkout@v4
with:
submodules: recursive
- uses: r-lib/actions/setup-r@v2
with:
r-version: "4.3"
use-public-rspm: true
- name: Install system dependencies for igraph
run: sudo apt-get update && sudo apt-get install -y libglpk40
- name: Set up environment
run: |
echo "LINUX_VERSION=$(uname -rs)" >> $GITHUB_ENV
- name: Cache Python packages
uses: actions/cache@v4
with:
path: renv/python/virtualenvs/renv-python-3.10
key: python-${{env.LINUX_VERSION}}-${{ env.pythonLocation }}-${{ hashFiles('requirements.txt') }}
restore-keys: python-${{env.LINUX_VERSION}}-${{ env.pythonLocation }}-
- uses: r-lib/actions/setup-renv@v2
- uses: viash-io/viash-actions/setup@v6
- name: Install Quarto
uses: quarto-dev/quarto-actions/setup@v2
with:
version: 1.5.57
- name: If PR, cache several directories
if: github.event_name == 'pull_request'
uses: actions/cache@v4
with:
key: quarto-${{ github.ref_name }}
restore-keys: quarto
path: |
.quarto
_docs
_freeze
- name: Render with Quarto
shell: bash -l {0}
run: |
quarto render --profile evaluate_code
- name: Clean up
shell: bash -l {0}
run: |
rm -rf !(_docs)
rm .gitignore !(_docs)
rm -rf .quarto !(_docs)
rm .gitmodules !(_docs)
rm .renvignore !(_docs)
rm .Rprofile !(_docs)
rm -rf .github !(_docs)
mv _docs/* .
rm -rf _docs
- name: Deploy to target branch
uses: peaceiris/actions-gh-pages@v4
with:
github_token: ${{ secrets.GITHUB_TOKEN }}
publish_branch: "render/main"
publish_dir: .