Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Fixes #3451 Replace 'neuronal brush cell' with 'unipolar brush cell' #3452

Merged
merged 2 commits into from
Dec 17, 2024
Merged

Fixes #3451 Replace 'neuronal brush cell' with 'unipolar brush cell' #3452

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
03c38b6
Fixes #3451
Caroline-99 Dec 17, 2024
3399565
Merge branch 'master' into 3451-granular-layer-of-cerebellar-cortex-i…
Caroline-99 Dec 17, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
42 changes: 21 additions & 21 deletions src/mappings/biomappings.sssom.tsv
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,24 +1,26 @@
#curie_map:
# BTO: http://purl.obolibrary.org/obo/BTO_
# IDOMAL: http://purl.obolibrary.org/obo/IDOMAL_
# UBERON: http://purl.obolibrary.org/obo/UBERON_
# VO: http://purl.obolibrary.org/obo/VO_
# mesh: http://id.nlm.nih.gov/mesh/
# orcid: https://orcid.org/
#mapping_set_id: https://w3id.org/biopragmatics/biomappings/sssom/biomappings.sssom.tsv
#mapping_set_version: 0.3.8.dev0
#mapping_set_title: Biomappings
#mapping_set_description: Biomappings is a repository of community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources. It's also a place where anyone can contribute curations of predicted mappings or their own novel mappings.
# BTO: "http://purl.obolibrary.org/obo/BTO_"
# IDOMAL: "http://purl.obolibrary.org/obo/IDOMAL_"
# UBERON: "http://purl.obolibrary.org/obo/UBERON_"
# VO: "http://purl.obolibrary.org/obo/VO_"
# mesh: "http://id.nlm.nih.gov/mesh/"
# obo: "http://purl.obolibrary.org/obo/"
# orcid: "https://orcid.org/"
#mapping_set_id: "https://w3id.org/biopragmatics/biomappings/sssom/biomappings.sssom.tsv"
#mapping_set_version: "0.3.8.dev0"
#mapping_set_title: "Biomappings"
#mapping_set_description: "Biomappings is a repository of community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources. It's also a place where anyone can contribute curations of predicted mappings or their own novel mappings."
#creator_id:
# - orcid:0000-0001-9439-5346
# - orcid:0000-0002-1216-4761
# - orcid:0000-0002-2046-6145
# - orcid:0000-0002-2627-0696
# - orcid:0000-0002-6601-2165
# - orcid:0000-0003-1307-2508
# - orcid:0000-0003-4423-4370
#license: https://creativecommons.org/publicdomain/zero/1.0/
#mapping_provider: https://github.com/biopragmatics/biomappings
# - "orcid:0000-0001-9439-5346"
# - "orcid:0000-0002-1216-4761"
# - "orcid:0000-0002-2046-6145"
# - "orcid:0000-0002-2627-0696"
# - "orcid:0000-0002-6601-2165"
# - "orcid:0000-0003-1307-2508"
# - "orcid:0000-0003-4423-4370"
#license: "https://creativecommons.org/publicdomain/zero/1.0/"
#subject_source: "obo:uberon/core.owl"
#mapping_provider: "https://github.com/biopragmatics/biomappings"
subject_id subject_label predicate_id predicate_modifier object_id object_label mapping_justification author_id mapping_tool confidence
UBERON:0000016 endocrine pancreas skos:exactMatch mesh:D007515 Islets of Langerhans semapv:LexicalMatching generate_uberon_mesh_mappings.py 0.9
UBERON:0000017 exocrine pancreas skos:exactMatch mesh:D046790 Pancreas, Exocrine semapv:ManualMappingCuration orcid:0000-0001-9439-5346
Expand Down Expand Up @@ -286,8 +288,6 @@ UBERON:2001553 manubrium skos:exactMatch mesh:D008371 Manubrium semapv:ManualMa
UBERON:2001977 pad skos:exactMatch Not mesh:D058729 Peripheral Arterial Disease semapv:ManualMappingCuration orcid:0000-0001-9439-5346
UBERON:3010463 animal cap skos:exactMatch BTO:0004724 animal cap semapv:ManualMappingCuration orcid:0000-0003-4423-4370 generate_uberon_bto_mappings.py 0.9
UBERON:3010586 vasa efferentia skos:exactMatch BTO:0002254 vas efferens semapv:ManualMappingCuration orcid:0000-0003-4423-4370 https://github.com/biomappings/biomappings/blob/530a1b/scripts/generate_uberon_bto_mappings.py 0.556
UBERON:3011045 gasserian ganglion skos:exactMatch mesh:D012668 Trigeminal Ganglion semapv:LexicalMatching generate_uberon_mesh_mappings.py 0.9
UBERON:3011048 genital system skos:exactMatch mesh:D005835 Genitalia semapv:LexicalMatching generate_uberon_mesh_mappings.py 0.9
UBERON:4000104 ganoine skos:exactMatch mesh:C067951 ganoine semapv:ManualMappingCuration orcid:0000-0001-9439-5346
UBERON:4000163 anal fin skos:exactMatch BTO:0004652 anal fin semapv:ManualMappingCuration orcid:0000-0003-4423-4370 generate_uberon_bto_mappings.py 0.9
UBERON:4000164 caudal fin skos:exactMatch BTO:0001827 tail fin semapv:ManualMappingCuration orcid:0000-0003-4423-4370 https://github.com/biomappings/biomappings/blob/530a1b/scripts/generate_uberon_bto_mappings.py 0.556
Expand Down
24 changes: 12 additions & 12 deletions src/mappings/fbbt.sssom.tsv
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,17 +1,17 @@
#curie_map:
# FBbt: http://purl.obolibrary.org/obo/FBbt_
# ORCID: https://orcid.org/
# UBERON: http://purl.obolibrary.org/obo/UBERON_
# obo: http://purl.obolibrary.org/obo/
#mapping_set_id: http://purl.obolibrary.org/obo/fbbt/fbbt-mappings.sssom.tsv
#mapping_set_description: Mappings between the Drosophila Anatomy Ontology and foreign ontologies.
# FBbt: "http://purl.obolibrary.org/obo/FBbt_"
# ORCID: "https://orcid.org/"
# UBERON: "http://purl.obolibrary.org/obo/UBERON_"
# obo: "http://purl.obolibrary.org/obo/"
#mapping_set_id: "http://purl.obolibrary.org/obo/fbbt/fbbt-mappings.sssom.tsv"
#mapping_set_description: "Mappings between the Drosophila Anatomy Ontology and foreign ontologies."
#creator_id:
# - ORCID:0000-0002-1373-1705
# - ORCID:0000-0002-6095-8718
#license: https://creativecommons.org/licenses/by/4.0/
#subject_source: obo:fbbt.owl
#object_source: obo:uberon.owl
#mapping_date: 2024-07-12
# - "ORCID:0000-0002-1373-1705"
# - "ORCID:0000-0002-6095-8718"
#license: "https://creativecommons.org/licenses/by/4.0/"
#subject_source: "obo:fbbt.owl"
#object_source: "obo:uberon/core.owl"
#mapping_date: "2024-07-12"
subject_id subject_label predicate_id object_id object_label mapping_justification comment
FBbt:00000001 organism semapv:crossSpeciesExactMatch UBERON:0000468 multicellular organism semapv:ManualMappingCuration
FBbt:00000002 tagma semapv:crossSpeciesExactMatch UBERON:6000002 arthropod tagma semapv:ManualMappingCuration
Expand Down
Loading
Loading