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Merge pull request #1694 from obophenotype/remove-Not
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remove "not" in CL
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@shawntanzk
shawntanzk authored Sep 14, 2022
2 parents de1c9ea + 55e0d05 commit 7be8384
Showing 1 changed file with 12 additions and 13 deletions.
25 changes: 12 additions & 13 deletions src/ontology/cl-edit.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -3939,9 +3939,9 @@ SubClassOf(obo:CL_0000085 ObjectSomeValuesFrom(obo:RO_0002160 obo:NCBITaxon_7742

# Class: obo:CL_0000086 (germ line stem cell (sensu Nematoda and Protostomia))

AnnotationAssertion(obo:RO_0002161 obo:CL_0000086 obo:NCBITaxon_33511)
AnnotationAssertion(rdfs:label obo:CL_0000086 "germ line stem cell (sensu Nematoda and Protostomia)"^^xsd:string)
SubClassOf(obo:CL_0000086 obo:CL_0000014)
SubClassOf(obo:CL_0000086 ObjectAllValuesFrom(obo:RO_0002162 ObjectComplementOf(obo:NCBITaxon_33511)))

# Class: obo:CL_0000087 (male germ line stem cell (sensu Nematoda and Protostomia))

Expand Down Expand Up @@ -4363,9 +4363,9 @@ SubClassOf(obo:CL_0000129 ObjectSomeValuesFrom(obo:RO_0002202 ObjectIntersection

# Class: obo:CL_0000130 (neuron associated cell (sensu Nematoda and Protostomia))

AnnotationAssertion(obo:RO_0002161 obo:CL_0000130 obo:NCBITaxon_33511)
AnnotationAssertion(rdfs:label obo:CL_0000130 "neuron associated cell (sensu Nematoda and Protostomia)"^^xsd:string)
SubClassOf(obo:CL_0000130 obo:CL_0000095)
SubClassOf(obo:CL_0000130 ObjectAllValuesFrom(obo:RO_0002162 ObjectComplementOf(obo:NCBITaxon_33511)))

# Class: obo:CL_0000131 (gut endothelial cell)

Expand Down Expand Up @@ -6070,10 +6070,10 @@ AnnotationAssertion(owl:deprecated obo:CL_0000337 "true"^^xsd:boolean)

# Class: obo:CL_0000338 (neuroblast (sensu Nematoda and Protostomia))

AnnotationAssertion(obo:RO_0002161 obo:CL_0000338 obo:NCBITaxon_33511)
AnnotationAssertion(oboInOwl:hasBroadSynonym obo:CL_0000338 "neuroblast"^^xsd:string)
AnnotationAssertion(rdfs:label obo:CL_0000338 "neuroblast (sensu Nematoda and Protostomia)"^^xsd:string)
SubClassOf(obo:CL_0000338 obo:CL_0000047)
SubClassOf(obo:CL_0000338 ObjectAllValuesFrom(obo:RO_0002162 ObjectComplementOf(obo:NCBITaxon_33511)))

# Class: obo:CL_0000339 (glioblast (sensu Vertebrata))

Expand All @@ -6087,16 +6087,16 @@ SubClassOf(obo:CL_0000339 ObjectSomeValuesFrom(obo:RO_0002160 obo:NCBITaxon_7742

# Class: obo:CL_0000340 (glioblast (sensu Nematoda and Protostomia))

AnnotationAssertion(obo:RO_0002161 obo:CL_0000340 obo:NCBITaxon_33511)
AnnotationAssertion(rdfs:label obo:CL_0000340 "glioblast (sensu Nematoda and Protostomia)"^^xsd:string)
SubClassOf(obo:CL_0000340 obo:CL_0000030)
SubClassOf(obo:CL_0000340 obo:CL_0000130)
SubClassOf(obo:CL_0000340 ObjectAllValuesFrom(obo:RO_0002162 ObjectComplementOf(obo:NCBITaxon_33511)))

# Class: obo:CL_0000341 (pigment cell (sensu Nematoda and Protostomia))

AnnotationAssertion(obo:RO_0002161 obo:CL_0000341 obo:NCBITaxon_33511)
AnnotationAssertion(rdfs:label obo:CL_0000341 "pigment cell (sensu Nematoda and Protostomia)"^^xsd:string)
SubClassOf(obo:CL_0000341 obo:CL_0000147)
SubClassOf(obo:CL_0000341 ObjectAllValuesFrom(obo:RO_0002162 ObjectComplementOf(obo:NCBITaxon_33511)))

# Class: obo:CL_0000342 (pigment cell (sensu Vertebrata))

Expand Down Expand Up @@ -6322,10 +6322,10 @@ AnnotationAssertion(owl:deprecated obo:CL_0000370 "true"^^xsd:boolean)
# Class: obo:CL_0000371 (protoplast)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "ISBN:08199377X"^^xsd:string) obo:IAO_0000115 obo:CL_0000371 "The cell protoplasm after removal of the cell wall."^^xsd:string)
AnnotationAssertion(obo:RO_0002161 obo:CL_0000371 obo:NCBITaxon_33208)
AnnotationAssertion(oboInOwl:hasDbXref obo:CL_0000371 "MESH:D011523"^^xsd:string)
AnnotationAssertion(rdfs:label obo:CL_0000371 "protoplast"^^xsd:string)
SubClassOf(obo:CL_0000371 obo:CL_0000578)
SubClassOf(obo:CL_0000371 ObjectSomeValuesFrom(obo:RO_0002162 ObjectComplementOf(obo:NCBITaxon_33208)))

# Class: obo:CL_0000372 (tormogen cell)

Expand Down Expand Up @@ -6406,9 +6406,9 @@ SubClassOf(obo:CL_0000384 obo:CL_0000630)

# Class: obo:CL_0000385 (prohemocyte (sensu Nematoda and Protostomia))

AnnotationAssertion(obo:RO_0002161 obo:CL_0000385 obo:NCBITaxon_33511)
AnnotationAssertion(rdfs:label obo:CL_0000385 "prohemocyte (sensu Nematoda and Protostomia)"^^xsd:string)
SubClassOf(obo:CL_0000385 obo:CL_0000390)
SubClassOf(obo:CL_0000385 ObjectAllValuesFrom(obo:RO_0002162 ObjectComplementOf(obo:NCBITaxon_33511)))

# Class: obo:CL_0000386 (attachment cell)

Expand Down Expand Up @@ -6441,9 +6441,9 @@ SubClassOf(obo:CL_0000389 obo:CL_0000658)

# Class: obo:CL_0000390 (blood cell (sensu Nematoda and Protostomia))

AnnotationAssertion(obo:RO_0002161 obo:CL_0000390 obo:NCBITaxon_33511)
AnnotationAssertion(rdfs:label obo:CL_0000390 "blood cell (sensu Nematoda and Protostomia)"^^xsd:string)
SubClassOf(obo:CL_0000390 obo:CL_0000081)
SubClassOf(obo:CL_0000390 ObjectAllValuesFrom(obo:RO_0002162 ObjectComplementOf(obo:NCBITaxon_33511)))

# Class: obo:CL_0000391 (podocyte (sensu Diptera))

Expand Down Expand Up @@ -6997,10 +6997,10 @@ EquivalentClasses(obo:CL_0000467 ObjectIntersectionOf(obo:CL_0000151 ObjectSomeV

# Class: obo:CL_0000468 (neuroglioblast (sensu Nematoda and Protostomia))

AnnotationAssertion(obo:RO_0002161 obo:CL_0000468 obo:NCBITaxon_33511)
AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_0000468 "neuroglioblast")
AnnotationAssertion(rdfs:label obo:CL_0000468 "neuroglioblast (sensu Nematoda and Protostomia)"^^xsd:string)
SubClassOf(obo:CL_0000468 obo:CL_0000047)
SubClassOf(obo:CL_0000468 ObjectAllValuesFrom(obo:RO_0002162 ObjectComplementOf(obo:NCBITaxon_33511)))

# Class: obo:CL_0000469 (ganglion mother cell)

Expand Down Expand Up @@ -7398,16 +7398,16 @@ SubClassOf(obo:CL_0000518 ObjectSomeValuesFrom(obo:RO_0002160 obo:NCBITaxon_7742
# Class: obo:CL_0000519 (phagocyte (sensu Nematoda and Protostomia))

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "GOC:tfm"^^xsd:string) obo:IAO_0000115 obo:CL_0000519 "A phagocyte from organisms in the Nematoda or Protostomia clades."^^xsd:string)
AnnotationAssertion(obo:RO_0002161 obo:CL_0000519 obo:NCBITaxon_33511)
AnnotationAssertion(rdfs:label obo:CL_0000519 "phagocyte (sensu Nematoda and Protostomia)"^^xsd:string)
SubClassOf(obo:CL_0000519 obo:CL_0000234)
SubClassOf(obo:CL_0000519 ObjectAllValuesFrom(obo:RO_0002162 ObjectComplementOf(obo:NCBITaxon_33511)))

# Class: obo:CL_0000520 (prokaryotic cell)

AnnotationAssertion(obo:RO_0002161 obo:CL_0000520 obo:NCBITaxon_2759)
AnnotationAssertion(oboInOwl:hasDbXref obo:CL_0000520 "MESH:D011387"^^xsd:string)
AnnotationAssertion(rdfs:label obo:CL_0000520 "prokaryotic cell"^^xsd:string)
SubClassOf(obo:CL_0000520 obo:CL_0000003)
SubClassOf(obo:CL_0000520 ObjectAllValuesFrom(obo:RO_0002162 ObjectComplementOf(obo:NCBITaxon_2759)))

# Class: obo:CL_0000521 (fungal cell)

Expand Down Expand Up @@ -12860,7 +12860,7 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "GOC:add"^^xsd:string) Annotat
AnnotationAssertion(<http://purl.org/dc/terms/contributor> obo:CL_0001068 <https://orcid.org/0000-0001-9990-8331>)
AnnotationAssertion(<http://purl.org/dc/terms/date> obo:CL_0001068 "2017-01-30T20:54:12Z"^^xsd:dateTime)
AnnotationAssertion(rdfs:label obo:CL_0001068 "ILC1")
EquivalentClasses(obo:CL_0001068 ObjectIntersectionOf(obo:CL_0001067 ObjectComplementOf(ObjectSomeValuesFrom(obo:RO_0002215 obo:GO_0001909))))
SubClassOf(obo:CL_0001068 obo:CL_0001067)

# Class: obo:CL_0001069 (group 2 innate lymphoid cell)

Expand Down Expand Up @@ -17158,7 +17158,6 @@ AnnotationAssertion(oboInOwl:hasDbXref obo:CL_0002371 "FMA:72300"^^xsd:string)
AnnotationAssertion(oboInOwl:hasDbXref obo:CL_0002371 "WBbt:0008378"^^xsd:string)
AnnotationAssertion(oboInOwl:inSubset obo:CL_0002371 <http://purl.obolibrary.org/obo/ubprop#_upper_level>)
AnnotationAssertion(rdfs:label obo:CL_0002371 "somatic cell"^^xsd:string)
EquivalentClasses(obo:CL_0002371 ObjectIntersectionOf(obo:CL_0000003 ObjectComplementOf(obo:CL_0000039)))
SubClassOf(obo:CL_0002371 obo:CL_0000003)

# Class: obo:CL_0002372 (myotube)
Expand Down

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