Added missing class, new release

obophenotype · May 21, 2020 · 1597dbf · 1597dbf
1 parent c614512
commit 1597dbf
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Showing 23 changed files with 19,337 additions and 13,703 deletions.
diff --git a/cl-base.json b/cl-base.json
diff --git a/cl-base.obo b/cl-base.obo
@@ -1,5 +1,5 @@
 format-version: 1.2
-data-version: cl/releases/2020-05-20/cl-base.owl
+data-version: cl/releases/2020-05-21/cl-base.owl
 subsetdef: ubprop:upper_level "abstract upper-level terms not directly useful for analysis"
 synonymtypedef: HUMAN_PREFERRED "preferred term when talking about an instance of this class in Homo sapiens"
 synonymtypedef: LATIN "latin term"
@@ -21900,6 +21900,14 @@ intersection_of: CL:0002489 ! double negative thymocyte
 intersection_of: RO:0002215 GO:0050777
 created_by: http://orcid.org/0000-0001-5208-3432
 
+[Term]
+id: CL:0011025
+name: exhausted T cell
+synonym: "An effector T cell that displays impaired effector functions (e.g., rapid production of effector cytokines, cytotoxicity) and has limited proliferative potential." EXACT [PMID:26544946]
+synonym: "Tex cell" EXACT []
+is_a: CL:0000911 ! effector T cell
+created_by: http://orcid.org/0000-0001-5208-3432
+
 [Term]
 id: CL:0011100
 name: galanergic neuron

diff --git a/cl-base.owl b/cl-base.owl
@@ -12,7 +12,7 @@
      xmlns:ubprop="http://purl.obolibrary.org/obo/ubprop#"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/cl/cl-base.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/cl/releases/2020-05-20/cl-base.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/cl/releases/2020-05-21/cl-base.owl"/>
         <dc:contributor>Alexander Diehl</dc:contributor>
         <dc:contributor>Ceri van Slyke</dc:contributor>
         <dc:contributor>Chris Mungall</dc:contributor>
@@ -63083,6 +63083,24 @@ Covers cells actively being cultured or stored in a quiescent state for future u
 
 
 
+    <!-- http://purl.obolibrary.org/obo/CL_0011025 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/CL_0011025">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/CL_0000911"/>
+        <oboInOwl:created_by rdf:resource="http://orcid.org/0000-0001-5208-3432"/>
+        <oboInOwl:hasExactSynonym>An effector T cell that displays impaired effector functions (e.g., rapid production of effector cytokines, cytotoxicity) and has limited proliferative potential.</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>Tex cell</oboInOwl:hasExactSynonym>
+        <rdfs:label>exhausted T cell</rdfs:label>
+    </owl:Class>
+    <owl:Axiom>
+        <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/CL_0011025"/>
+        <owl:annotatedProperty rdf:resource="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
+        <owl:annotatedTarget>An effector T cell that displays impaired effector functions (e.g., rapid production of effector cytokines, cytotoxicity) and has limited proliferative potential.</owl:annotatedTarget>
+        <oboInOwl:hasDbXref>PMID:26544946</oboInOwl:hasDbXref>
+    </owl:Axiom>
+
+
+
     <!-- http://purl.obolibrary.org/obo/CL_0011100 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/CL_0011100">
@@ -64190,6 +64208,12 @@ plexiform layer using GABA.</owl:annotatedTarget>
         <oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">cell</oboInOwl:hasOBONamespace>
         <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">smooth muscle cell of small intestine</rdfs:label>
     </owl:Class>
+    <owl:Axiom>
+        <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/CL_1000275"/>
+        <owl:annotatedProperty rdf:resource="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
+        <owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">non-striated muscle fiber of small intestine</owl:annotatedTarget>
+        <oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">FMA:15050</oboInOwl:hasDbXref>
+    </owl:Axiom>
     <owl:Axiom>
         <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/CL_1000275"/>
         <owl:annotatedProperty rdf:resource="http://www.w3.org/2000/01/rdf-schema#subClassOf"/>
@@ -64202,12 +64226,6 @@ plexiform layer using GABA.</owl:annotatedTarget>
         <owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A smooth muscle cell that is part of the small intestine.</owl:annotatedTarget>
         <oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">GOC:tfm</oboInOwl:hasDbXref>
     </owl:Axiom>
-    <owl:Axiom>
-        <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/CL_1000275"/>
-        <owl:annotatedProperty rdf:resource="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
-        <owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">non-striated muscle fiber of small intestine</owl:annotatedTarget>
-        <oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">FMA:15050</oboInOwl:hasDbXref>
-    </owl:Axiom>