27 fix pipeline

[deemp]

Closes #27

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PR-Codex overview

This PR focuses on updating the EO version and making changes to the pipeline script.

Detailed summary

• Updated the EO version from 0.34.2 to 0.34.3.
• Added a step to install EO before running the pipeline.
• Modified the pipeline script to include additional steps for normalization and printing expressions.
• Added a Perl command to remove trailing newline in the output file.
• Added a diff command to compare the Phi expressions before and after normalization.

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