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add more tips re https
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@eeholmes
eeholmes committed Dec 18, 2024
1 parent e35bc59 commit 89aa03b
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2 changes: 2 additions & 0 deletions config/dhub/README.md
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November 2024

To restart hub after changing `dconfig-resource.yaml`
```
helm upgrade --cleanup-on-fail --render-subchart-notes dhub dask/daskhub --namespace dhub --version=2023.1.0 --values dconfig-resource.yaml
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134 changes: 81 additions & 53 deletions docs/posts/JHub-User-Guide.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>

<meta charset="utf-8">
<meta name="generator" content="quarto-1.4.433">
<meta name="generator" content="quarto-1.6.39">

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="description" content="How to use the hub">

<title>Eli’s JupyterHub notes - JHub User Instructions</title>
<title>JHub User Instructions – Eli’s JupyterHub notes</title>
<style>
code{white-space: pre-wrap;}
span.smallcaps{font-variant: small-caps;}
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<script src="../site_libs/quarto-html/tippy.umd.min.js"></script>
<script src="../site_libs/quarto-html/anchor.min.js"></script>
<link href="../site_libs/quarto-html/tippy.css" rel="stylesheet">
<link href="../site_libs/quarto-html/quarto-syntax-highlighting.css" rel="stylesheet" class="quarto-color-scheme" id="quarto-text-highlighting-styles">
<link href="../site_libs/quarto-html/quarto-syntax-highlighting-dark.css" rel="prefetch" class="quarto-color-scheme quarto-color-alternate" id="quarto-text-highlighting-styles">
<link href="../site_libs/quarto-html/quarto-syntax-highlighting-e26003cea8cd680ca0c55a263523d882.css" rel="stylesheet" class="quarto-color-scheme" id="quarto-text-highlighting-styles">
<link href="../site_libs/quarto-html/quarto-syntax-highlighting-dark-d166b450ba5a8e9f7a0ab969bf6592c1.css" rel="prefetch" class="quarto-color-scheme quarto-color-alternate" id="quarto-text-highlighting-styles">
<script src="../site_libs/bootstrap/bootstrap.min.js"></script>
<link href="../site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
<link href="../site_libs/bootstrap/bootstrap.min.css" rel="stylesheet" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
<link href="../site_libs/bootstrap/bootstrap-dark.min.css" rel="prefetch" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="light">
<link href="../site_libs/bootstrap/bootstrap-8c89492777ddc1c6ab649c9c2f2ee7ae.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
<link href="../site_libs/bootstrap/bootstrap-dark-a2029ef242be1da2c8c50230e0c63228.min.css" rel="prefetch" append-hash="true" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="light">
<script id="quarto-search-options" type="application/json">{
"location": "sidebar",
"copy-button": false,
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"search-more-match-text": "more match in this document",
"search-more-matches-text": "more matches in this document",
"search-clear-button-title": "Clear",
"search-text-placeholder": "",
"search-detached-cancel-button-title": "Cancel",
"search-submit-button-title": "Submit",
"search-label": "Search"
Expand All @@ -81,13 +82,13 @@
<header id="quarto-header" class="headroom fixed-top">
<nav class="quarto-secondary-nav">
<div class="container-fluid d-flex">
<button type="button" class="quarto-btn-toggle btn" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar,#quarto-sidebar-glass" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
<button type="button" class="quarto-btn-toggle btn" data-bs-toggle="collapse" role="button" data-bs-target=".quarto-sidebar-collapse-item" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
<i class="bi bi-layout-text-sidebar-reverse"></i>
</button>
<nav class="quarto-page-breadcrumbs" aria-label="breadcrumb"><ol class="breadcrumb"><li class="breadcrumb-item"><a href="../posts/JHub-User-Guide.html">JHub User Guide</a></li></ol></nav>
<a class="flex-grow-1" role="button" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar,#quarto-sidebar-glass" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
<a class="flex-grow-1" role="navigation" data-bs-toggle="collapse" data-bs-target=".quarto-sidebar-collapse-item" aria-controls="quarto-sidebar" aria-expanded="false" aria-label="Toggle sidebar navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
</a>
<button type="button" class="btn quarto-search-button" aria-label="" onclick="window.quartoOpenSearch();">
<button type="button" class="btn quarto-search-button" aria-label="Search" onclick="window.quartoOpenSearch();">
<i class="bi bi-search"></i>
</button>
</div>
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<!-- content -->
<div id="quarto-content" class="quarto-container page-columns page-rows-contents page-layout-article">
<!-- sidebar -->
<nav id="quarto-sidebar" class="sidebar collapse collapse-horizontal sidebar-navigation docked overflow-auto">
<nav id="quarto-sidebar" class="sidebar collapse collapse-horizontal quarto-sidebar-collapse-item sidebar-navigation docked overflow-auto">
<div class="pt-lg-2 mt-2 text-center sidebar-header">
<a href="../index.html" class="sidebar-logo-link">
<img src="../images/nmfs-opensci-logo2-notext.png" alt="" class="sidebar-logo py-0 d-lg-inline d-none">
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</ul>
</div>
</nav>
<div id="quarto-sidebar-glass" data-bs-toggle="collapse" data-bs-target="#quarto-sidebar,#quarto-sidebar-glass"></div>
<div id="quarto-sidebar-glass" class="quarto-sidebar-collapse-item" data-bs-toggle="collapse" data-bs-target=".quarto-sidebar-collapse-item"></div>
<!-- margin-sidebar -->
<div id="quarto-margin-sidebar" class="sidebar margin-sidebar">
<nav id="TOC" role="doc-toc" class="toc-active">
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}
return false;
}
const clipboard = new window.ClipboardJS('.code-copy-button', {
text: function(trigger) {
const codeEl = trigger.previousElementSibling.cloneNode(true);
for (const childEl of codeEl.children) {
if (isCodeAnnotation(childEl)) {
childEl.remove();
}
}
return codeEl.innerText;
}
});
clipboard.on('success', function(e) {
const onCopySuccess = function(e) {
// button target
const button = e.trigger;
// don't keep focus
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}, 1000);
// clear code selection
e.clearSelection();
}
const getTextToCopy = function(trigger) {
const codeEl = trigger.previousElementSibling.cloneNode(true);
for (const childEl of codeEl.children) {
if (isCodeAnnotation(childEl)) {
childEl.remove();
}
}
return codeEl.innerText;
}
const clipboard = new window.ClipboardJS('.code-copy-button:not([data-in-quarto-modal])', {
text: getTextToCopy
});
clipboard.on('success', onCopySuccess);
if (window.document.getElementById('quarto-embedded-source-code-modal')) {
const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
text: getTextToCopy,
container: window.document.getElementById('quarto-embedded-source-code-modal')
});
clipboardModal.on('success', onCopySuccess);
}
var localhostRegex = new RegExp(/^(?:http|https):\/\/localhost\:?[0-9]*\//);
var mailtoRegex = new RegExp(/^mailto:/);
var filterRegex = new RegExp("https:\/\/nmfs-opensci\.github\.io\/nmfs-jhub");
var isInternal = (href) => {
return filterRegex.test(href) || localhostRegex.test(href) || mailtoRegex.test(href);
}
// Inspect non-navigation links and adorn them if external
var links = window.document.querySelectorAll('a[href]:not(.nav-link):not(.navbar-brand):not(.toc-action):not(.sidebar-link):not(.sidebar-item-toggle):not(.pagination-link):not(.no-external):not([aria-hidden]):not(.dropdown-item):not(.quarto-navigation-tool):not(.about-link)');
for (var i=0; i<links.length; i++) {
const link = links[i];
if (!isInternal(link.href)) {
// undo the damage that might have been done by quarto-nav.js in the case of
// links that we want to consider external
if (link.dataset.originalHref !== undefined) {
link.href = link.dataset.originalHref;
}
}
}
function tippyHover(el, contentFn, onTriggerFn, onUntriggerFn) {
const config = {
allowHTML: true,
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try { href = new URL(href).hash; } catch {}
const id = href.replace(/^#\/?/, "");
const note = window.document.getElementById(id);
return note.innerHTML;
if (note) {
return note.innerHTML;
} else {
return "";
}
});
}
const xrefs = window.document.querySelectorAll('a.quarto-xref');
Expand All @@ -619,38 +651,28 @@ <h2 class="anchored" data-anchor-id="trouble-shooting">Trouble-shooting</h2>
}
}
stripColumnClz(note)
const typesetMath = (el) => {
if (window.MathJax) {
// MathJax Typeset
window.MathJax.typeset([el]);
} else if (window.katex) {
// KaTeX Render
var mathElements = el.getElementsByClassName("math");
var macros = [];
for (var i = 0; i < mathElements.length; i++) {
var texText = mathElements[i].firstChild;
if (mathElements[i].tagName == "SPAN") {
window.katex.render(texText.data, mathElements[i], {
displayMode: mathElements[i].classList.contains('display'),
throwOnError: false,
macros: macros,
fleqn: false
});
}
}
}
}
if (id === null || id.startsWith('sec-')) {
// Special case sections, only their first couple elements
const container = document.createElement("div");
if (note.children && note.children.length > 2) {
for (let i = 0; i < 2; i++) {
container.appendChild(note.children[i].cloneNode(true));
container.appendChild(note.children[0].cloneNode(true));
for (let i = 1; i < note.children.length; i++) {
const child = note.children[i];
if (child.tagName === "P" && child.innerText === "") {
continue;
} else {
container.appendChild(child.cloneNode(true));
break;
}
}
if (window.Quarto?.typesetMath) {
window.Quarto.typesetMath(container);
}
typesetMath(container);
return container.innerHTML
} else {
typesetMath(note);
if (window.Quarto?.typesetMath) {
window.Quarto.typesetMath(note);
}
return note.innerHTML;
}
} else {
Expand All @@ -659,8 +681,14 @@ <h2 class="anchored" data-anchor-id="trouble-shooting">Trouble-shooting</h2>
if (anchorLink) {
anchorLink.remove();
}
typesetMath(note);
return note.innerHTML;
if (window.Quarto?.typesetMath) {
window.Quarto.typesetMath(note);
}
if (note.classList.contains("callout")) {
return note.outerHTML;
} else {
return note.innerHTML;
}
}
}
for (var i=0; i<xrefs.length; i++) {
Expand Down Expand Up @@ -883,7 +911,7 @@ <h2 class="anchored" data-anchor-id="trouble-shooting">Trouble-shooting</h2>
</script>
<nav class="page-navigation">
<div class="nav-page nav-page-previous">
<a href="../index.html" class="pagination-link aria-label=" home"="">
<a href="../index.html" class="pagination-link" aria-label="Home">
<i class="bi bi-arrow-left-short"></i> <span class="nav-page-text">Home</span>
</a>
</div>
Expand All @@ -901,7 +929,7 @@ <h2 class="anchored" data-anchor-id="trouble-shooting">Trouble-shooting</h2>
</div>
<div class="nav-footer-center">
<p><img src="../images/nmfs-opensci-logo2-notext.png" alt="NMFS OpenSci logo" style="width:150px"><br>NMFS OpenSci (2023)</p>
</div>
<div class="toc-actions d-sm-block d-md-none"><ul><li><a href="https://github.com/nmfs-opensci/nmfs-jhub/edit/main/posts/JHub-User-Guide.Rmd" class="toc-action"><i class="bi bi-github"></i>Edit this page</a></li><li><a href="https://github.com/nmfs-opensci/nmfs-jhub/issues/new" class="toc-action"><i class="bi empty"></i>Report an issue</a></li><li><a href="https://github.com/nmfs-opensci/nmfs-jhub/blob/main/posts/JHub-User-Guide.Rmd" class="toc-action"><i class="bi empty"></i>View source</a></li></ul></div></div>
<div class="nav-footer-right">
&nbsp;
</div>
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