clean up index pg

nmfs-opensci · May 1, 2024 · a57a313 · a57a313
1 parent e499525
commit a57a313
Show file tree

Hide file tree

Showing 12 changed files with 49 additions and 1,004 deletions.
diff --git a/cloud-paradigm.md b/cloud-paradigm.md
diff --git a/content/01-intro-to-cloud.qmd b/content/01-intro-to-cloud.qmd
@@ -2,7 +2,7 @@
 title: Intro the Cloud
 ---
 
-::: {.callout-note icon=false}
+![](../images/cloud-overview.png)
 
 Lecture on NASA earth data in the cloud by Michele Thornton (NASA Openscapes) [Video](https://www.youtube.com/watch?v=E5Dpeap16hU)
 

diff --git a/docs/cloud-paradigm.html b/docs/cloud-paradigm.html
diff --git a/docs/content/01-intro-to-cloud.html b/docs/content/01-intro-to-cloud.html
@@ -375,7 +375,7 @@ <h1 class="title">Intro the Cloud</h1>
 </header>
 
 
-<p>::: {.callout-note icon=false}</p>
+<p><img src="../images/cloud-overview.png" class="img-fluid"></p>
 <p>Lecture on NASA earth data in the cloud by Michele Thornton (NASA Openscapes) <a href="https://www.youtube.com/watch?v=E5Dpeap16hU">Video</a></p>
 <div class="quarto-video"><iframe data-external="1" src="https://www.youtube.com/embed/E5Dpeap16hU" width="250" title="" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen=""></iframe></div>
 

diff --git a/docs/images/cloud-overview.png b/docs/images/cloud-overview.png
diff --git a/docs/index.html b/docs/index.html
@@ -383,7 +383,7 @@ <h1 class="title">EDMW 2024 - Workshop 3B</h1>
 </header>
 
 
-<p>Welcome to the NOAA Fisheries workshop focused on geospatial analysis using ocean ‘big data’. Today, we are focused on using data from NASA <a href="https://www.earthdata.nasa.gov/">EarthData</a> but the skills you will learn are transferable to other ways that you might get earth data, e.g.&nbsp;NESDIS, NCEI, ERDDAP servers, Copernicus, etc.</p>
+<p><img src="images/cloud-overview.png" style="width:250px; float:right;"> Welcome to the NOAA Fisheries workshop focused on geospatial analysis using ocean ‘big data’. Today, we are focused on using data from NASA <a href="https://www.earthdata.nasa.gov/">EarthData</a> but the skills you will learn are transferable to other ways that you might get earth data, e.g.&nbsp;NESDIS, NCEI, ERDDAP servers, Copernicus, etc.</p>
 <p>This session will also introduce to working with JupyterHubs. We will use both Jupyter Lab (Python) and RStudio (R) within our JupyterHub. Go to <a href="setup.html">set-up</a> for the basic orientation and how to get on the JupyterHub.</p>
 <section id="topics-for-may-15-2024" class="level2">
 <h2 class="anchored" data-anchor-id="topics-for-may-15-2024">Topics for May 15, 2024</h2>

diff --git a/docs/search.json b/docs/search.json
diff --git a/docs/sitemap.xml b/docs/sitemap.xml
@@ -6,7 +6,7 @@
   </url>
   <url>
     <loc>https://nmfs-opensci.github.io/EDMW-EarthData-Workshop-2024/tutorials/r/2-subset-and-plot.html</loc>
-    <lastmod>2024-05-01T18:31:31.529Z</lastmod>
+    <lastmod>2024-05-01T19:02:43.052Z</lastmod>
   </url>
   <url>
     <loc>https://nmfs-opensci.github.io/EDMW-EarthData-Workshop-2024/tutorials/r/05-r-geospatial.html</loc>
@@ -30,7 +30,7 @@
   </url>
   <url>
     <loc>https://nmfs-opensci.github.io/EDMW-EarthData-Workshop-2024/index.html</loc>
-    <lastmod>2024-05-01T03:18:09.424Z</lastmod>
+    <lastmod>2024-05-01T19:20:39.313Z</lastmod>
   </url>
   <url>
     <loc>https://nmfs-opensci.github.io/EDMW-EarthData-Workshop-2024/content/02-rstudio.html</loc>
@@ -52,13 +52,9 @@
     <loc>https://nmfs-opensci.github.io/EDMW-EarthData-Workshop-2024/coc.html</loc>
     <lastmod>2024-05-01T03:18:09.172Z</lastmod>
   </url>
-  <url>
-    <loc>https://nmfs-opensci.github.io/EDMW-EarthData-Workshop-2024/cloud-paradigm.html</loc>
-    <lastmod>2024-05-01T03:18:09.172Z</lastmod>
-  </url>
   <url>
     <loc>https://nmfs-opensci.github.io/EDMW-EarthData-Workshop-2024/content/01-intro-to-cloud.html</loc>
-    <lastmod>2024-05-01T03:18:09.172Z</lastmod>
+    <lastmod>2024-05-01T19:24:08.331Z</lastmod>
   </url>
   <url>
     <loc>https://nmfs-opensci.github.io/EDMW-EarthData-Workshop-2024/content/01-welcome.html</loc>
@@ -98,7 +94,7 @@
   </url>
   <url>
     <loc>https://nmfs-opensci.github.io/EDMW-EarthData-Workshop-2024/tutorials/r/1-earthdatalogin.html</loc>
-    <lastmod>2024-05-01T18:31:23.429Z</lastmod>
+    <lastmod>2024-05-01T19:01:30.329Z</lastmod>
   </url>
   <url>
     <loc>https://nmfs-opensci.github.io/EDMW-EarthData-Workshop-2024/tutorials/r/3-extract-satellite-data-within-boundary.html</loc>

diff --git a/docs/tutorials/r/1-earthdatalogin.html b/docs/tutorials/r/1-earthdatalogin.html
@@ -7,7 +7,7 @@
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
 
-<title>2024 EDMW Workshop 3B - Earthdatalogin Search and Discovery</title>
+<title>2024 EDMW Workshop 3B - Earthdata Search and Discovery</title>
 <style>
 code{white-space: pre-wrap;}
 span.smallcaps{font-variant: small-caps;}
@@ -382,7 +382,6 @@ <h2 id="toc-title">On this page</h2>
   <ul class="collapse">
   <li><a href="#summary" id="toc-summary" class="nav-link active" data-scroll-target="#summary">Summary</a></li>
   <li><a href="#prerequisites" id="toc-prerequisites" class="nav-link" data-scroll-target="#prerequisites">Prerequisites</a></li>
-  <li><a href="#learning-objectives" id="toc-learning-objectives" class="nav-link" data-scroll-target="#learning-objectives">Learning Objectives</a></li>
   <li><a href="#conclusion" id="toc-conclusion" class="nav-link" data-scroll-target="#conclusion">Conclusion</a></li>
   </ul>
 <div class="toc-actions"><ul class="collapse"><li><a href="https://github.com/nmfs-opensci/EDMW-EarthData-Workshop-2024/edit/main/tutorials/r/1-earthdatalogin.qmd" class="toc-action"><i class="bi bi-github"></i>Edit this page</a></li><li><a href="https://github.com/nmfs-opensci/EDMW-EarthData-Workshop-2024/issues/new" class="toc-action"><i class="bi empty"></i>Report an issue</a></li><li><a href="https://github.com/nmfs-opensci/EDMW-EarthData-Workshop-2024/blob/main/tutorials/r/1-earthdatalogin.qmd" class="toc-action"><i class="bi empty"></i>View source</a></li></ul></div></nav>
@@ -401,7 +400,7 @@ <h2 id="toc-title">On this page</h2>
 
 <header id="title-block-header" class="quarto-title-block default"><nav class="quarto-page-breadcrumbs quarto-title-breadcrumbs d-none d-lg-block" aria-label="breadcrumb"><ol class="breadcrumb"><li class="breadcrumb-item">Tutorials</li><li class="breadcrumb-item"><a href="../../tutorials/r/1-earthdatalogin.html">Tutorials in R</a></li><li class="breadcrumb-item"><a href="../../tutorials/r/1-earthdatalogin.html">Tutorial 1</a></li></ol></nav>
 <div class="quarto-title">
-<h1 class="title">Earthdatalogin Search and Discovery</h1>
+<h1 class="title">Earthdata Search and Discovery</h1>
 </div>
 
 
@@ -418,6 +417,23 @@ <h1 class="title">Earthdatalogin Search and Discovery</h1>
 </header>
 
 
+<div class="callout callout-style-default callout-note callout-titled" title="Learning Objectives">
+<div class="callout-header d-flex align-content-center">
+<div class="callout-icon-container">
+<i class="callout-icon"></i>
+</div>
+<div class="callout-title-container flex-fill">
+Learning Objectives
+</div>
+</div>
+<div class="callout-body-container callout-body">
+<ol type="1">
+<li>How to authenticate with <code>earthdatalogin</code></li>
+<li>How to use <code>earthdatalogin</code> to search for data using spatial and temporal filters</li>
+<li>How to make a plot without downloading the data</li>
+</ol>
+</div>
+</div>
 <section id="summary" class="level2">
 <h2 class="anchored" data-anchor-id="summary">Summary</h2>
 <p>In this example we will use the <code>earthdatalogin</code> R package to search for data collections from NASA Earthdata. <code>earthdatalogin</code> is a R package that simplifies data discovery and access to NASA Earth science data by providing an abstraction layer for NASA’s <a href="https://cmr.earthdata.nasa.gov/search/site/docs/search/api.html">Common Metadata Repository (CMR) API</a> Search API. The library makes searching for data more approachable by using a simpler notation instead of low level HTTP queries. <code>earthdatalogin</code> takes the trouble out of Earthdata Login <strong>authentication</strong>, makes <strong>search</strong> easier, and provides a stream-lined way to download or stream search results into R data objects.</p>
@@ -426,14 +442,6 @@ <h2 class="anchored" data-anchor-id="summary">Summary</h2>
 <section id="prerequisites" class="level2">
 <h2 class="anchored" data-anchor-id="prerequisites">Prerequisites</h2>
 <p>An Earthdata Login account is required to access data from NASA Earthdata. Please visit <a href="https://urs.earthdata.nasa.gov" class="uri">https://urs.earthdata.nasa.gov</a> to register and manage your Earthdata Login account. This account is free to create and only takes a moment to set up.</p>
-</section>
-<section id="learning-objectives" class="level2">
-<h2 class="anchored" data-anchor-id="learning-objectives">Learning Objectives</h2>
-<ol type="1">
-<li>How to authenticate with <code>earthdatalogin</code></li>
-<li>How to use <code>earthdatalogin</code> to search for data using spatial and temporal filters</li>
-<li>How to explore and work with search results</li>
-</ol>
 <section id="import-required-packages" class="level3">
 <h3 class="anchored" data-anchor-id="import-required-packages">Import Required Packages</h3>
 <p><em>Note: See the set-up tab (in left nav bar) for instructions on getting set up on your own computer.</em></p>

diff --git a/docs/tutorials/r/2-subset-and-plot.html b/docs/tutorials/r/2-subset-and-plot.html
@@ -420,6 +420,23 @@ <h1 class="title">Subset and Plot</h1>
 </header>
 
 
+<div class="callout callout-style-default callout-note callout-titled" title="Learning Objectives">
+<div class="callout-header d-flex align-content-center">
+<div class="callout-icon-container">
+<i class="callout-icon"></i>
+</div>
+<div class="callout-title-container flex-fill">
+Learning Objectives
+</div>
+</div>
+<div class="callout-body-container callout-body">
+<ol type="1">
+<li>How to plot a subset of a data file</li>
+<li>How to create a data cube</li>
+<li>How to subset and aggregate a data cube</li>
+</ol>
+</div>
+</div>
 <section id="load-packages" class="level2">
 <h2 class="anchored" data-anchor-id="load-packages">Load packages</h2>
 <div class="cell">

diff --git a/images/cloud-overview.png b/images/cloud-overview.png
diff --git a/index.md b/index.md
@@ -3,6 +3,7 @@ title: "EDMW 2024 - Workshop 3B"
 subtitle: "Introduction to using earth data in the cloud for scientific workflows"
 ---
 
+<img src="images/cloud-overview.png" style="width:250px; float:right;">
 Welcome to the NOAA Fisheries workshop focused on geospatial analysis using ocean 'big data'. Today, we are focused on using data from NASA [EarthData](https://www.earthdata.nasa.gov/) but the skills you will learn are transferable to other ways that you might get earth data, e.g. NESDIS, NCEI, ERDDAP servers, Copernicus, etc.
 
 This session will also introduce to working with JupyterHubs. We will use both Jupyter Lab (Python) and RStudio (R) within our JupyterHub. Go to [set-up](setup.html) for the basic orientation and how to get on the JupyterHub.