Cast fwd["info"] to mne.Info and fwd["src"] to mne.SourceSpaces when …

…loading a forward solution with h5io (mne-tools#12804) Co-authored-by: Eric Larson <[email protected]>
nmarkowitz · Aug 21, 2024 · 99dd0e1 · 99dd0e1
1 parent 223d4aa
commit 99dd0e1
Show file tree

Hide file tree

Showing 4 changed files with 9 additions and 4 deletions.
diff --git a/doc/_includes/institutional-partners.rst b/doc/_includes/institutional-partners.rst
@@ -19,7 +19,7 @@ Current partners
 - `Children’s Hospital of Philadelphia Research Institute <https://www.research.chop.edu/imaging/>`_
 - `Donders Institute for Brain, Cognition and Behaviour at Radboud University <https://www.ru.nl/donders/>`_
 - `Harvard Medical School <https://hms.harvard.edu/>`_
-- `Human Neuroscience Platform at Fondation Campus Biotech Geneva <https://hnp.fcbg.ch/>`_
+- `Fondation Campus Biotech Geneva <https://fcbg.ch/>`_
 - `Institut national de recherche en informatique et en automatique <https://www.inria.fr/>`_
 - `Karl-Franzens-Universität Graz <https://www.uni-graz.at/>`_
 - `Massachusetts General Hospital <https://www.massgeneral.org/>`_

diff --git a/doc/changes/devel/12804.bugfix.rst b/doc/changes/devel/12804.bugfix.rst
@@ -0,0 +1 @@
+Cast ``fwd["info"]`` to :class:`~mne.Info` and ``fwd["src"]`` to :class:`~mne.SourceSpaces` when loading a forward solution from an HDF5 file, by `Mathieu Scheltienne`_.
diff --git a/doc/conf.py b/doc/conf.py
@@ -1108,9 +1108,9 @@ def append_attr_meth_examples(app, what, name, obj, options, lines):
             size=xl,
         ),
         dict(
-            name="Human Neuroscience Platforn at Fondation Campus Biotech Geneva",  # noqa E501
+            name="Fondation Campus Biotech Geneva",
             img="FCBG.svg",
-            url="https://hnp.fcbg.ch/",
+            url="https://fcbg.ch/",
             size=sm,
         ),
     ],

diff --git a/mne/forward/forward.py b/mne/forward/forward.py
@@ -53,6 +53,7 @@
 from ..label import Label
 from ..source_estimate import _BaseSourceEstimate, _BaseVectorSourceEstimate
 from ..source_space._source_space import (
+    SourceSpaces,
     _get_src_nn,
     _read_source_spaces_from_tree,
     _set_source_space_vertices,
@@ -913,7 +914,10 @@ def _write_forward_hdf5(fname, fwd):
 
 def _read_forward_hdf5(fname):
     read_hdf5, _ = _import_h5io_funcs()
-    return Forward(read_hdf5(fname)["fwd"])
+    fwd = Forward(read_hdf5(fname)["fwd"])
+    fwd["info"] = Info(fwd["info"])
+    fwd["src"] = SourceSpaces(fwd["src"])
+    return fwd
 
 
 def _write_forward_solution(fid, fwd):
Original file line number	Diff line number	Diff line change
		@@ -0,0 +1 @@
		Cast ``fwd["info"]`` to :class:`~mne.Info` and ``fwd["src"]`` to :class:`~mne.SourceSpaces` when loading a forward solution from an HDF5 file, by `Mathieu Scheltienne`_.