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debugging running tests#22

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tclose wants to merge 21 commits intomainnipype/nipype2pydra:mainfrom run-testsnipype/nipype2pydra:run-testsCopy head branch name to clipboard

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Commits on May 29, 2024

• debugging running tests

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• fixing defaults for function interfaces

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• set mandatory to False when there is a valid default

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Commits on May 31, 2024

• added support for _format_arg and _parse_inputs methods

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• debugging reworked _list_outputs handling

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• handled super methods properly

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Commits on Jun 1, 2024

• added callables to outputs

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• touching up format_arg super handling

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• handling special super methods

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• fixed handling of super methods, added supported for aggregate_outputs and fix bug with inputs handling in _list_outputs

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• debugged changes so that all packages build successfully again

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• finally got all packages to convert again!

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Commits on Jun 2, 2024

• debugging updates to conversions to handle function task super methods

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• all packages build again after refactor

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• moved constants to bottom of file just in case they rely on a local function

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Commits on Jun 3, 2024

• disabled return dict unwrapping (used in _list_outputs) by default. Added copyfile to python functions

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• added option to explicitly route connections from/to explicit inputs and outputs

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• debugged workflows and spatial normalisation monster interface

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• unwrapped super methods in shell helper methods

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Commits on Jun 7, 2024

• debugging mriqc/niworkflows conversions

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Commits on Jul 5, 2024

• debugging switch to class-symbols

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