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General cleanup #447

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merged 9 commits into from
Sep 30, 2024
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5 changes: 0 additions & 5 deletions modules.json
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pigz_uncompress is no longer used and can be removed

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untarfiles shall be replaced by untar

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This is not straightforward, lets do it on a separate PR: https://github.com/orgs/nf-core/projects/74/views/7?pane=issue&itemId=81583371

Original file line number Diff line number Diff line change
Expand Up @@ -36,11 +36,6 @@
"git_sha": "06c8865e36741e05ad32ef70ab3fac127486af48",
"installed_by": ["modules"]
},
"cat/cat": {
"branch": "master",
"git_sha": "06c8865e36741e05ad32ef70ab3fac127486af48",
"installed_by": ["modules"]
},
"cat/fastq": {
"branch": "master",
"git_sha": "06c8865e36741e05ad32ef70ab3fac127486af48",
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54 changes: 0 additions & 54 deletions modules/local/bowtie_map_mirna.nf

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5 changes: 0 additions & 5 deletions modules/nf-core/cat/cat/environment.yml

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78 changes: 0 additions & 78 deletions modules/nf-core/cat/cat/main.nf

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36 changes: 0 additions & 36 deletions modules/nf-core/cat/cat/meta.yml

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191 changes: 0 additions & 191 deletions modules/nf-core/cat/cat/tests/main.nf.test

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