This should fix umitools extract

nf-core · Jan 18, 2024 · c51f54d · c51f54d
1 parent e95f075
commit c51f54d
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/conf/modules.config b/conf/modules.config
@@ -153,7 +153,7 @@ if (!params.skip_fastp) {
 
 if (params.with_umi && !params.skip_umi_extract) {
     process {
-        withName: '.*:FASTQC_UMITOOLS_FASTP:UMITOOLS_EXTRACT' {
+        withName: '.*:FASTQ_FASTQC_UMITOOLS_FASTP:UMITOOLS_EXTRACT' {
             ext.args   = [
                     params.umitools_extract_method ? "--extract-method=${params.umitools_extract_method}" : '',
                     params.umitools_bc_pattern     ? "--bc-pattern='${params.umitools_bc_pattern}'" : '',