Fix input cardinality

nf-core · Jan 18, 2024 · 533a0f3 · 533a0f3
1 parent 4baf752
commit 533a0f3
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/subworkflows/local/umi_dedup.nf b/subworkflows/local/umi_dedup.nf
@@ -38,8 +38,8 @@ workflow DEDUPLICATE_UMIS {
     BAM_SORT_STATS_SAMTOOLS ( UMI_MAP_GENOME.out.bam, Channel.empty() )
     ch_versions = ch_versions.mix(BAM_SORT_STATS_SAMTOOLS.out.versions)
 
-    //ch_umi_dedup = BAM_SORT_STATS_SAMTOOLS.out.bam.join(BAM_SORT_STATS_SAMTOOLS.out.bai)
-    UMITOOLS_DEDUP ( BAM_SORT_STATS_SAMTOOLS.out.bam, val_get_dedup_stats)
+    ch_umi_dedup = BAM_SORT_STATS_SAMTOOLS.out.bam.join(BAM_SORT_STATS_SAMTOOLS.out.bai)
+    UMITOOLS_DEDUP ( ch_umi_dedup, val_get_dedup_stats)
     ch_versions = ch_versions.mix(UMITOOLS_DEDUP.out.versions)
     ch_dedup_stats = ch_dedup_stats.mix(UMITOOLS_DEDUP.out.tsv_edit_distance).join(UMITOOLS_DEDUP.out.tsv_per_umi).join(UMITOOLS_DEDUP.out.tsv_umi_per_position)