test: update tests succeeded size

nf-core · Dec 10, 2024 · 33943b1 · 33943b1
1 parent 6c21e4c
commit 33943b1
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Showing 5 changed files with 5 additions and 5 deletions.
diff --git a/tests/test_contamination_tech_reps.nf.test b/tests/test_contamination_tech_reps.nf.test
@@ -20,7 +20,7 @@ nextflow_pipeline {
             assertAll(
                 { assert workflow.success },
                 { assert snapshot(UTILS.removeNextflowVersion("$outputDir")).match("software_versions") },
-                { assert workflow.trace.succeeded().size() == 100 },
+                { assert workflow.trace.succeeded().size() == 103 },
 
                 { assert snapshot(
                     path("$outputDir/contaminant_filter/filter/Clone1_N1_trimmed.contamination_mqc.yaml").exists(), //TODO see if we can make these deterministic or why they are non-deterministic

diff --git a/tests/test_mirgenedb.nf.test b/tests/test_mirgenedb.nf.test
@@ -19,7 +19,7 @@ nextflow_pipeline {
             assertAll(
                 { assert workflow.success },
                 { assert snapshot(UTILS.removeNextflowVersion("$outputDir")).match("software_versions") },
-                { assert workflow.trace.succeeded().size() == 104 },
+                { assert workflow.trace.succeeded().size() == 107 },
                 { assert workflow.trace.failed().size() == 1 },
 
                 { assert snapshot(

diff --git a/tests/test_nextflex.nf.test b/tests/test_nextflex.nf.test
@@ -19,7 +19,7 @@ nextflow_pipeline {
             assertAll(
                 { assert workflow.success },
                 { assert snapshot(UTILS.removeNextflowVersion("$outputDir")).match("software_versions") },
-                { assert workflow.trace.succeeded().size() == 79 },
+                { assert workflow.trace.succeeded().size() == 82 },
 
                 { assert snapshot(
                     path("$outputDir/mirna_quant/bam/mature/sample2_mature.sorted.idxstats"),

diff --git a/tests/test_skipfastp.nf.test b/tests/test_skipfastp.nf.test
@@ -19,7 +19,7 @@ nextflow_pipeline {
             assertAll(
                 { assert workflow.success },
                 { assert snapshot(UTILS.removeNextflowVersion("$outputDir")).match("software_versions") },
-                { assert workflow.trace.succeeded().size() == 64 },
+                { assert workflow.trace.succeeded().size() == 66 },
 
                 { assert snapshot(
                     path("$outputDir/mirna_quant/mirtop/joined_samples_mirtop.tsv").exists(),

diff --git a/tests/test_umi.nf.test b/tests/test_umi.nf.test
@@ -19,7 +19,7 @@ nextflow_pipeline {
             assertAll(
                 { assert workflow.success },
                 { assert snapshot(UTILS.removeNextflowVersion("$outputDir")).match("software_versions") },
-                { assert workflow.trace.succeeded().size() == 74 },
+                { assert workflow.trace.succeeded().size() == 76 },
 
                 { assert snapshot(
                     path("$outputDir/mirna_quant/bam/mature/SRX8195118_SRR11631014_mature.sorted.stats"),