nf-core CI

Add options for saving intermediate files #721

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Re-run triggered February 9, 2024 07:19

christopher-mohr

#314

christopher-mohr:save_intermediate_optional

Status Failure

Total duration 20m 54s

Artifacts –

ci.yml

on: pull_request

Matrix: Run pipeline with test data

Annotations

2 errors and 7 warnings

Run pipeline with test data (latest-everything, test)

Process completed with exit code 1.

Run pipeline with test data (23.04.0, test)

The operation was canceled.

Run pipeline with test data (23.04.0, test_no_genome)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (latest-everything, test_no_genome)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (23.04.0, test_umi)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (latest-everything, test_umi)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (latest-everything, test)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (latest-everything, test)

You are running out of disk space. The runner will stop working when the machine runs out of disk space. Free space left: 40 MB

Run pipeline with test data (23.04.0, test)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.