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Update subworkflows/local/prepare_genome/main.nf
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Co-authored-by: Maxime U Garcia <[email protected]>
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nvnieuwk and maxulysse authored Jan 9, 2025
1 parent ceeb934 commit 64950b7
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion subworkflows/local/prepare_genome/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -74,7 +74,7 @@ workflow PREPARE_GENOME {
star_index = STAR_GENOMEGENERATE.out.index.first() // path: star/index/
dbsnp_tbi = TABIX_DBSNP.out.tbi.map{ _meta, tbi -> [tbi] }.collect() // path: dbsnb.vcf.gz.tbi
known_indels_tbi = TABIX_KNOWN_INDELS.out.tbi.map{ _meta, tbi -> [tbi] }.collect() // path: {known_indels*}.vcf.gz.tbi
versions = ch_versions // channel: [ ch_versions.yml ]
versions = ch_versions // channel: [ versions.yml ]
// bedtools_sort = bedtools_sort // path: sort.bed
// bedtools_merge = bedtools_merge // path: merge.bed
}

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