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Fix glimpse2 concordance usage
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LouisLeNezet authored and LouisLeNezet committed Dec 2, 2024
1 parent 275d31d commit 69306d9
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30 changes: 17 additions & 13 deletions modules/nf-core/glimpse2/concordance/main.nf

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3 changes: 1 addition & 2 deletions subworkflows/local/vcf_concordance_glimpse2/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -32,8 +32,7 @@ workflow VCF_CONCORDANCE_GLIMPSE2 {

GLIMPSE2_CONCORDANCE (
ch_concordance,
[[], [], params.bins, [], []],
params.min_val_gl, params.min_val_dp
[[], [], params.bins, [], [], params.min_val_gl, params.min_val_dp]
)
ch_versions = ch_versions.mix(GLIMPSE2_CONCORDANCE.out.versions.first())

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