nextclade: edit dataset shortcuts

nextstrain · Jan 9, 2024 · 535294e · 535294e
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commit 535294e
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Showing 8 changed files with 8 additions and 8 deletions.
diff --git a/nextclade/dataset_config/h1n1pdm/ha/CY121680/pathogen.json b/nextclade/dataset_config/h1n1pdm/ha/CY121680/pathogen.json
@@ -2,7 +2,7 @@
     "nucMutLabelMap": {},
     "nucMutLabelMapReverse": {},
     "shortcuts": [
-      "flu-h1n1pdm-ha-broad",
+      "flu_h1n1pdm_ha_broad",
       "nextstrain/flu/h1n1pdm/ha/california-7-2009"
     ],
     "aaMotifs": [

diff --git a/nextclade/dataset_config/h1n1pdm/ha/MW626062/pathogen.json b/nextclade/dataset_config/h1n1pdm/ha/MW626062/pathogen.json
@@ -2,7 +2,7 @@
     "nucMutLabelMap": {},
     "nucMutLabelMapReverse": {},
     "shortcuts": [
-      "flu-h1n1pdm-ha",
+      "flu_h1n1pdm_ha",
       "nextstrain/flu/h1n1pdm",
       "nextstrain/flu/h1n1pdm/ha",
       "nextstrain/flu/h1n1pdm/ha/wisconsin-588-2019"

diff --git a/nextclade/dataset_config/h1n1pdm/na/MW626056/pathogen.json b/nextclade/dataset_config/h1n1pdm/na/MW626056/pathogen.json
@@ -2,7 +2,7 @@
     "nucMutLabelMap": {},
     "nucMutLabelMapReverse": {},
     "shortcuts": [
-      "flu-h1n1pdm-na",
+      "flu_h1n1pdm_na",
       "nextstrain/flu/h1n1pdm/na",
       "nextstrain/flu/h1n1pdm/na/wisconsin-588-2019"
     ],

diff --git a/nextclade/dataset_config/h3n2/ha/CY163680/pathogen.json b/nextclade/dataset_config/h3n2/ha/CY163680/pathogen.json
@@ -2,7 +2,7 @@
     "nucMutLabelMap": {},
     "nucMutLabelMapReverse": {},
     "shortcuts": [
-      "flu-h3n2-ha-broad",
+      "flu_h3n2_ha_broad",
       "nextstrain/flu/h3n2/ha/wisconsin-67-2005"
     ],
     "aaMotifs": [

diff --git a/nextclade/dataset_config/h3n2/ha/EPI1857216/pathogen.json b/nextclade/dataset_config/h3n2/ha/EPI1857216/pathogen.json
@@ -2,7 +2,7 @@
   "nucMutLabelMap": {},
   "nucMutLabelMapReverse": {},
   "shortcuts": [
-    "flu-h3n2-ha",
+    "flu_h3n2_ha",
     "nextstrain/flu/h3n2",
     "nextstrain/flu/h3n2/ha",
     "nextstrain/flu/h3n2/ha/darwin-6-2021"

diff --git a/nextclade/dataset_config/h3n2/na/EPI1857215/pathogen.json b/nextclade/dataset_config/h3n2/na/EPI1857215/pathogen.json
@@ -2,7 +2,7 @@
     "nucMutLabelMap": {},
     "nucMutLabelMapReverse": {},
     "shortcuts": [
-      "flu-h3n2-na",
+      "flu_h3n2_na",
       "nextstrain/flu/h3n2/na",
       "nextstrain/flu/h3n2/na/darwin-6-2021"
     ],

diff --git a/nextclade/dataset_config/vic/ha/KX058884/pathogen.json b/nextclade/dataset_config/vic/ha/KX058884/pathogen.json
@@ -2,7 +2,7 @@
     "nucMutLabelMap": {},
     "nucMutLabelMapReverse": {},
     "shortcuts": [
-      "flu-vic-ha",
+      "flu_vic_ha",
       "nextstrain/flu/vic",
       "nextstrain/flu/vic/ha",
       "nextstrain/flu/vic/ha/brisbane-60-2008"

diff --git a/nextclade/dataset_config/vic/na/CY073894/pathogen.json b/nextclade/dataset_config/vic/na/CY073894/pathogen.json
@@ -2,7 +2,7 @@
     "nucMutLabelMap": {},
     "nucMutLabelMapReverse": {},
     "shortcuts": [
-      "flu-vic-na",
+      "flu_vic_na",
       "nextstrain/flu/vic/na",
       "nextstrain/flu/vic/na/brisbane-60-2008"
     ],