Update to match neurodatascience/nipoppy:main #102
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…nd update default invocation files (nipoppy#265) * move Nipoppy-specific default values from descriptors to invocation files * use a single descriptor file for Heudiconv * fix descriptors not having CLI entrypoints... * add default tracker config files for fMRIPrep * add default tracker config files for Freesurfer * fix failing tests after merge * add output_spaces to fMRIPrep invocations * rename dcm2bids descriptors * add `converter` field to heudiconv convert invocation (dcm2niix, default)
bcmcpher
approved these changes
Jun 14, 2024
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PR created/updated automatically by create-pull-request GitHub action. Will be merged automatically by automerge-action if there are no merge conflicts.